Detailed information of deep learning profile BP000582.1

This page shows detailed deep learning-derived predictions and motifs for GABPA in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: GABPA
Model ID: BP000582.1
Cell line/tissue: MCF-7
Class: Tryptophan cluster factors
Family: Ets-related
Best Match(es): MA0062.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q06546  
Source: ENCSR000BUK
Model: BPNet

Contribution weight matrix (CWM)

A [ -2.18e-04 -1.30e-04 -7.03e-06 -9.32e-06 7.28e-02 5.29e-02 1.41e-03 -1.17e-03 ]
C [ 2.85e-02 5.63e-02 3.61e-05 4.87e-05 2.14e-04 1.03e-04 6.34e-04 3.47e-03 ]
G [ 5.37e-04 -1.20e-05 9.47e-02 8.16e-02 6.30e-05 8.74e-05 2.23e-02 -3.84e-04 ]
T [ -3.81e-04 -1.37e-04 9.03e-06 2.20e-05 9.65e-06 1.57e-04 -1.26e-04 1.71e-02 ]

Frequency matrix

A [ 7402 17053 25 638 51314 46656 13356 8910 ]
C [ 33205 36809 87 315 2323 3887 10882 18366 ]
G [ 14761 3875 58775 57408 3637 3419 30983 11614 ]
T [ 3543 1174 23 549 1637 4948 3690 20020 ]

13 profiles found for the same TF (GABPA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000192.1 GABPA ENCSR000BIW H1 Homo sapiens
BP000204.1 GABPA ENCSR350ORK liver Homo sapiens
BP000323.1 GABPA ENCSR269TNX HepG2 Homo sapiens
BP000347.1 GABPA ENCSR331HPA GM12878 Homo sapiens
BP000391.1 GABPA ENCSR038RXU MCF-7 Homo sapiens
BP000406.1 GABPA ENCSR000BTG SK-N-SH Homo sapiens
BP000563.1 GABPA ENCSR000BLO K562 Homo sapiens
BP000699.1 GABPA ENCSR000BTK HL-60 Homo sapiens
BP000823.1 GABPA ENCSR000BJK HepG2 Homo sapiens
BP000840.1 GABPA ENCSR038GMB liver Homo sapiens
Showing 10 profiles of page 1 from 2 pages