Detailed information of deep learning profile BP000583.1

This page shows detailed deep learning-derived predictions and motifs for CLOCK in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CLOCK
Model ID: BP000583.1
Cell line/tissue: MCF-7
Class: Basic helix-loop-helix factors (bHLH)
Family: PAS domain factors
Best Match(es): MA0819.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: O15516  
Source: ENCSR934JDG
Model: BPNet

Contribution weight matrix (CWM)

A [ 1.07e-04 1.84e-02 -8.27e-06 -1.00e-06 -1.68e-05 -2.28e-06 2.76e-03 ]
C [ 2.13e-02 -4.50e-05 2.53e-02 -7.12e-06 2.77e-05 -5.80e-06 6.44e-04 ]
G [ -9.51e-06 1.31e-04 -6.81e-05 2.77e-02 -7.73e-06 2.26e-02 -4.04e-04 ]
T [ -4.64e-07 -7.38e-05 2.22e-05 0.00e+00 2.06e-02 3.97e-05 3.38e-04 ]

Frequency matrix

A [ 1524 15539 130 330 384 263 6195 ]
C [ 18372 1627 18919 77 3136 691 6205 ]
G [ 967 3322 615 20941 1157 18649 4424 ]
T [ 495 871 1694 10 16682 1755 4534 ]

2 profiles found for the same TF (CLOCK) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000241.1 CLOCK ENCSR699YFX MCF-7 Homo sapiens
BP000847.1 CLOCK ENCSR228OQM K562 Homo sapiens
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