This page shows detailed deep learning-derived predictions and motifs for CTCF in middle frontal area 46 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000585.1 |
| Cell line/tissue: | middle frontal area 46 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR068DJS |
| Model: | BPNet |
| A [ | -1.85e-03 | -9.60e-04 | 2.79e-02 | -2.09e-03 | -5.90e-03 | 8.06e-02 | -4.56e-04 | 2.10e-02 | -3.67e-03 | -6.37e-04 | -1.18e-03 | -3.57e-03 | 9.24e-03 | -3.62e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.37e-02 | 1.84e-01 | -5.98e-04 | 6.61e-02 | 1.69e-02 | -1.29e-04 | -4.72e-05 | -4.36e-05 | 1.84e-04 | -7.48e-06 | -3.57e-04 | 1.06e-01 | -1.11e-03 | 3.52e-02 | ] |
| G [ | -1.98e-03 | -3.32e-04 | 7.42e-03 | 1.38e-02 | -2.25e-03 | 5.25e-04 | 1.97e-01 | 7.13e-02 | 5.73e-02 | 1.86e-01 | 1.26e-01 | -9.95e-04 | 6.32e-02 | 1.53e-02 | ] |
| T [ | -3.39e-03 | -5.71e-04 | -5.72e-03 | -2.12e-03 | 1.99e-02 | -2.56e-03 | -3.11e-04 | -5.30e-04 | 8.07e-03 | -4.91e-04 | -4.80e-04 | -3.32e-03 | -3.49e-03 | -1.63e-03 | ] |
| A [ | 3338 | 294 | 23060 | 1904 | 5306 | 28169 | 104 | 13851 | 1728 | 346 | 552 | 4442 | 13869 | 3145 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 25667 | 33128 | 1418 | 18569 | 13336 | 1073 | 21 | 267 | 1343 | 58 | 720 | 25773 | 1301 | 16894 | ] |
| G [ | 2257 | 100 | 4834 | 12016 | 2862 | 2418 | 33405 | 19207 | 18107 | 33007 | 29830 | 768 | 16977 | 10505 | ] |
| T [ | 2331 | 71 | 4281 | 1104 | 12089 | 1934 | 63 | 268 | 12415 | 182 | 2491 | 2610 | 1446 | 3049 | ] |
