This page shows detailed deep learning-derived predictions and motifs for CTCF in B cell using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000589.1 |
| Cell line/tissue: | B cell |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000AUV |
| Model: | BPNet |
| A [ | -2.09e-03 | -1.25e-03 | 2.16e-02 | -2.30e-03 | -5.69e-03 | 7.92e-02 | -3.83e-04 | 1.68e-02 | -4.42e-03 | -6.56e-04 | -1.89e-03 | -3.76e-03 | 7.45e-03 | -2.95e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.31e-02 | 1.76e-01 | 2.96e-04 | 5.93e-02 | 1.76e-02 | -2.69e-04 | -7.15e-05 | -1.35e-04 | -4.04e-04 | 9.30e-06 | 4.69e-04 | 9.11e-02 | -1.03e-04 | 3.39e-02 | ] |
| G [ | -2.10e-03 | -5.11e-04 | 6.28e-03 | 1.12e-02 | -2.15e-03 | 6.26e-04 | 1.86e-01 | 8.50e-02 | 6.33e-02 | 1.80e-01 | 1.18e-01 | -1.34e-04 | 6.01e-02 | 9.06e-03 | ] |
| T [ | -2.78e-03 | -9.82e-04 | -5.45e-03 | -2.04e-03 | 1.78e-02 | -2.68e-03 | -2.80e-04 | -5.55e-04 | 5.94e-03 | -3.93e-04 | -4.13e-04 | -3.06e-03 | -3.56e-03 | -7.22e-04 | ] |
| A [ | 5080 | 1641 | 30852 | 3608 | 7774 | 40748 | 470 | 17158 | 3287 | 416 | 1551 | 7513 | 18677 | 5344 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 38241 | 47778 | 3451 | 27382 | 20682 | 2070 | 120 | 537 | 2369 | 154 | 2615 | 36386 | 3306 | 24839 | ] |
| G [ | 3849 | 686 | 8703 | 17785 | 5112 | 4339 | 49819 | 32436 | 28521 | 49813 | 42483 | 2325 | 25826 | 14968 | ] |
| T [ | 3494 | 559 | 7657 | 1889 | 17095 | 3507 | 255 | 533 | 16487 | 281 | 4015 | 4440 | 2856 | 5514 | ] |
