This page shows detailed deep learning-derived predictions and motifs for CTCF in WERI-Rb-1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000591.1 |
| Cell line/tissue: | WERI-Rb-1 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DXW |
| Model: | BPNet |
| A [ | -9.78e-04 | -3.29e-03 | -3.33e-03 | -6.81e-04 | -8.02e-04 | 4.39e-03 | -7.69e-04 | -4.46e-04 | -2.00e-03 | 1.66e-02 | -2.33e-03 | -4.88e-03 | -1.00e-03 | -3.02e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.92e-03 | 5.08e-02 | -2.13e-04 | 9.81e-02 | 1.58e-01 | 5.46e-02 | 7.85e-02 | 1.72e-01 | 1.95e-03 | -1.87e-03 | 1.24e-02 | 4.66e-03 | -6.88e-04 | -1.98e-03 | ] |
| G [ | 3.20e-02 | 6.14e-04 | 7.86e-02 | 1.44e-03 | -1.43e-04 | -3.79e-04 | -2.48e-04 | -9.80e-05 | -4.73e-04 | 1.51e-02 | 5.09e-02 | 1.26e-03 | 1.60e-01 | 8.62e-02 | ] |
| T [ | -3.34e-03 | 4.99e-03 | -3.59e-03 | -2.27e-03 | -1.04e-03 | -5.71e-03 | 1.04e-02 | -4.36e-04 | 6.36e-02 | -4.27e-03 | -1.35e-03 | 2.22e-02 | -1.37e-03 | -1.87e-03 | ] |
| A [ | 9082 | 5356 | 7367 | 6210 | 1239 | 23429 | 1072 | 399 | 6568 | 25199 | 2897 | 14052 | 940 | 5136 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 21913 | 37634 | 4254 | 62015 | 73172 | 42706 | 50169 | 75455 | 7811 | 8062 | 29308 | 11518 | 1216 | 6145 | ] |
| G [ | 37506 | 7034 | 52245 | 4976 | 752 | 3090 | 753 | 115 | 2248 | 31461 | 38616 | 5306 | 71396 | 57538 | ] |
| T [ | 8072 | 26548 | 12706 | 3371 | 1410 | 7348 | 24580 | 604 | 59946 | 11852 | 5752 | 45698 | 3021 | 7753 | ] |
