This page shows detailed deep learning-derived predictions and motifs for CTCF in transverse colon using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000592.1 |
| Cell line/tissue: | transverse colon |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR558HTE |
| Model: | BPNet |
| A [ | 2.10e-03 | -9.20e-04 | -3.05e-04 | 1.90e-02 | -8.93e-04 | -3.01e-03 | 5.52e-02 | -1.62e-04 | 7.98e-03 | -1.72e-03 | -3.47e-04 | -8.47e-04 | -1.31e-03 | 7.32e-03 | -1.64e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | -2.10e-03 | 5.79e-02 | 1.03e-01 | -5.21e-04 | 3.53e-02 | 1.03e-02 | -2.36e-04 | -3.97e-06 | -2.80e-05 | -5.41e-06 | -4.69e-05 | -5.09e-04 | 5.57e-02 | -8.22e-04 | 1.52e-02 | ] |
| G [ | 1.46e-02 | -1.35e-03 | -8.82e-05 | 5.51e-03 | 4.70e-03 | -1.94e-03 | -4.51e-04 | 9.52e-02 | 3.95e-02 | 2.68e-02 | 9.76e-02 | 6.09e-02 | -6.83e-04 | 3.85e-02 | 5.12e-03 | ] |
| T [ | -2.21e-03 | -1.27e-03 | -1.74e-04 | -2.53e-03 | -7.59e-04 | 9.40e-03 | -1.07e-03 | -8.73e-05 | -1.79e-04 | 1.66e-03 | -2.16e-04 | -6.19e-04 | -1.36e-03 | -1.20e-03 | -6.15e-04 | ] |
| A [ | 3023 | 1028 | 169 | 7987 | 521 | 1634 | 10100 | 87 | 4113 | 667 | 140 | 490 | 1543 | 4447 | 1183 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1216 | 9621 | 11634 | 571 | 7195 | 5570 | 396 | 25 | 159 | 583 | 56 | 590 | 8905 | 626 | 5906 | ] |
| G [ | 5738 | 652 | 50 | 2024 | 3905 | 963 | 833 | 11746 | 7483 | 6650 | 11606 | 9923 | 482 | 6336 | 3718 | ] |
| T [ | 1929 | 604 | 52 | 1323 | 284 | 3738 | 576 | 47 | 150 | 4005 | 103 | 902 | 975 | 497 | 1098 | ] |