Detailed information of deep learning profile BP000595.1

This page shows detailed deep learning-derived predictions and motifs for IRF1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: IRF1
Model ID: BP000595.1
Cell line/tissue: HepG2
Class: Tryptophan cluster factors
Family: Interferon-regulatory factors
Best Match(es): MA0050.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P10914  
Source: ENCSR890DSP
Model: BPNet

Contribution weight matrix (CWM)

A [ 9.95e-03 -1.69e-04 -6.12e-06 -7.32e-06 3.22e-06 5.03e-06 1.39e-02 -1.69e-04 -4.89e-05 -1.35e-05 -1.33e-05 -1.32e-04 1.93e-03 -4.64e-05 -8.91e-04 -4.77e-04 ]
C [ -2.12e-04 1.29e-02 -1.90e-05 0.00e+00 -1.07e-04 3.64e-02 -7.25e-05 1.34e-02 3.07e-05 7.71e-06 4.47e-05 2.81e-02 -2.73e-04 2.84e-03 4.36e-05 -1.21e-04 ]
G [ 2.49e-03 5.42e-03 1.34e-04 3.82e-06 -2.17e-05 -3.22e-06 4.18e-03 2.78e-03 2.33e-05 8.45e-06 3.22e-06 -1.16e-04 4.54e-03 1.13e-03 4.62e-04 1.59e-04 ]
T [ -1.20e-03 -4.28e-04 3.13e-02 3.52e-02 3.44e-02 -6.98e-05 -8.98e-04 -8.62e-04 3.79e-02 3.99e-02 3.08e-02 -2.02e-04 -2.13e-03 -1.66e-03 9.17e-03 1.03e-02 ]

Frequency matrix

A [ 601 37 6 4 11 21 653 55 6 9 16 40 314 237 186 208 ]
C [ 99 652 12 6 41 1053 89 567 19 9 146 832 340 387 239 211 ]
G [ 335 387 28 15 8 6 297 302 19 9 24 55 280 283 200 177 ]
T [ 126 85 1115 1136 1101 81 122 237 1117 1134 975 234 227 254 536 565 ]

3 profiles found for the same TF (IRF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000312.1 IRF1 ENCSR000EGL K562 Homo sapiens
BP000418.1 IRF1 ENCSR000EGK K562 Homo sapiens
BP000993.1 IRF1 ENCSR854MCV K562 Homo sapiens
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