This page shows detailed deep learning-derived predictions and motifs for CTCF in middle frontal area 46 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000596.1 |
| Cell line/tissue: | middle frontal area 46 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR244KEW |
| Model: | BPNet |
| A [ | -1.79e-03 | -4.17e-03 | -3.78e-03 | -1.49e-04 | -5.35e-04 | 9.55e-03 | -5.39e-04 | -3.66e-04 | -2.89e-03 | 2.06e-02 | -2.18e-03 | -6.89e-03 | -5.82e-04 | -3.10e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.45e-02 | 6.71e-02 | -1.14e-03 | 1.36e-01 | 1.95e-01 | 6.11e-02 | 7.65e-02 | 1.99e-01 | 5.73e-04 | -2.08e-03 | 1.44e-02 | 8.90e-03 | -3.76e-04 | -2.11e-03 | ] |
| G [ | 3.85e-02 | -9.63e-04 | 1.16e-01 | -2.31e-04 | -1.62e-05 | 3.18e-04 | -3.47e-05 | -2.16e-05 | 1.61e-05 | 1.62e-02 | 6.62e-02 | -8.90e-04 | 1.94e-01 | 9.61e-02 | ] |
| T [ | -3.41e-03 | 1.09e-02 | -4.09e-03 | -1.59e-03 | -7.76e-04 | -4.17e-03 | 2.46e-02 | -3.34e-04 | 7.70e-02 | -5.56e-03 | -2.05e-03 | 2.91e-02 | -8.24e-04 | -1.66e-03 | ] |
| A [ | 3556 | 1765 | 2909 | 3098 | 226 | 13630 | 258 | 69 | 2029 | 13512 | 1165 | 4863 | 4 | 2634 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 11619 | 17463 | 990 | 31599 | 35866 | 19964 | 20345 | 36326 | 2613 | 3054 | 12878 | 4653 | 4 | 2445 | ] |
| G [ | 17865 | 1625 | 27805 | 1075 | 65 | 1202 | 277 | 8 | 1082 | 14065 | 20436 | 1424 | 36529 | 27731 | ] |
| T [ | 3509 | 15696 | 4845 | 777 | 392 | 1753 | 15669 | 146 | 30825 | 5917 | 2070 | 25609 | 12 | 3739 | ] |
