Detailed information of deep learning profile BP000597.1

This page shows detailed deep learning-derived predictions and motifs for GATA3 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: GATA3
Model ID: BP000597.1
Cell line/tissue: MCF-7
Class: Other C4 zinc finger-type factors
Family: C4-GATA-related
Best Match(es): MA0037.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P23772  
Source: ENCSR423RTK
Model: BPNet

Contribution weight matrix (CWM)

A [ 1.47e-02 0.00e+00 5.48e-02 0.00e+00 2.00e-02 2.03e-02 -1.09e-04 ]
C [ 1.96e-04 0.00e+00 0.00e+00 0.00e+00 6.69e-05 0.00e+00 6.26e-04 ]
G [ 0.00e+00 5.26e-02 0.00e+00 0.00e+00 4.41e-05 2.82e-05 7.10e-03 ]
T [ 1.59e-04 0.00e+00 0.00e+00 5.69e-02 2.89e-04 0.00e+00 1.34e-03 ]

Frequency matrix

A [ 115852 278 167219 12 73309 87883 46437 ]
C [ 5229 112 29 540 26959 15915 34736 ]
G [ 5492 167132 65 3 25098 30215 46274 ]
T [ 41010 61 270 167028 42218 33570 40136 ]

3 profiles found for the same TF (GATA3) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000419.1 GATA3 ENCSR000BTH SK-N-SH Homo sapiens
BP000827.1 GATA3 ENCSR000BST MCF-7 Homo sapiens
BP001107.1 GATA3 ENCSR000BMX T47D Homo sapiens
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