Detailed information of deep learning profile BP000597.1

This page shows detailed deep learning-derived predictions and motifs for GATA3 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: GATA3
Model ID: BP000597.1
Cell line/tissue: MCF-7
Class: Other C4 zinc finger-type factors
Family: C4-GATA-related
Best Match(es): MA0037.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P23772  
Source: ENCSR423RTK
Model: BPNet

Contribution weight matrix (CWM)

A [ 1.34e-03 0.00e+00 2.89e-04 5.69e-02 0.00e+00 0.00e+00 1.59e-04 ]
C [ 7.10e-03 2.82e-05 4.41e-05 0.00e+00 0.00e+00 5.26e-02 0.00e+00 ]
G [ 6.26e-04 0.00e+00 6.69e-05 0.00e+00 0.00e+00 0.00e+00 1.96e-04 ]
T [ -1.09e-04 2.03e-02 2.00e-02 0.00e+00 5.48e-02 0.00e+00 1.47e-02 ]

Frequency matrix

A [ 40136 33570 42218 167028 270 61 41010 ]
C [ 46274 30215 25098 3 65 167132 5492 ]
G [ 34736 15915 26959 540 29 112 5229 ]
T [ 46437 87883 73309 12 167219 278 115852 ]

3 profiles found for the same TF (GATA3) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000419.1 GATA3 ENCSR000BTH SK-N-SH Homo sapiens
BP000827.1 GATA3 ENCSR000BST MCF-7 Homo sapiens
BP001107.1 GATA3 ENCSR000BMX T47D Homo sapiens
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