This page shows detailed deep learning-derived predictions and motifs for CTCF in transverse colon using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000600.1 |
| Cell line/tissue: | transverse colon |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR449SEF |
| Model: | BPNet |
| A [ | -1.13e-03 | -2.33e-03 | -2.45e-03 | -5.44e-04 | -3.30e-04 | 3.17e-03 | -3.27e-04 | -1.80e-04 | -1.53e-03 | 1.58e-02 | -1.30e-03 | -4.06e-03 | -4.29e-04 | -2.23e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.53e-03 | 4.22e-02 | -3.26e-04 | 8.42e-02 | 1.29e-01 | 4.31e-02 | 5.57e-02 | 1.39e-01 | 1.06e-06 | -1.80e-03 | 9.01e-03 | 4.97e-03 | -2.13e-04 | -1.53e-03 | ] |
| G [ | 2.27e-02 | -3.24e-04 | 6.78e-02 | 2.84e-04 | -4.09e-05 | -2.09e-04 | -7.31e-05 | -3.76e-05 | -2.32e-04 | 1.26e-02 | 5.11e-02 | -4.95e-04 | 1.40e-01 | 7.67e-02 | ] |
| T [ | -1.91e-03 | 6.83e-03 | -2.08e-03 | -1.03e-03 | -5.07e-04 | -2.52e-03 | 1.28e-02 | -2.65e-04 | 6.80e-02 | -4.05e-03 | -1.35e-03 | 2.13e-02 | -4.49e-04 | -1.22e-03 | ] |
| A [ | 2808 | 1436 | 2573 | 2300 | 216 | 10812 | 267 | 77 | 1337 | 11024 | 718 | 3689 | 1 | 1673 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9507 | 15205 | 971 | 26418 | 29986 | 17148 | 18245 | 30321 | 1822 | 2215 | 10299 | 4019 | 8 | 1499 | ] |
| G [ | 15119 | 1494 | 22645 | 1080 | 93 | 1061 | 196 | 25 | 783 | 12823 | 18060 | 1069 | 30530 | 24789 | ] |
| T [ | 3138 | 12436 | 4381 | 772 | 276 | 1550 | 11862 | 148 | 26629 | 4508 | 1494 | 21794 | 32 | 2610 | ] |
