This page shows detailed deep learning-derived predictions and motifs for CTCF in middle frontal area 46 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000603.1 |
| Cell line/tissue: | middle frontal area 46 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR275JVX |
| Model: | BPNet |
| A [ | -1.51e-03 | -4.04e-03 | -4.23e-03 | -1.55e-04 | -5.38e-04 | 8.23e-03 | -5.66e-04 | -3.65e-04 | -2.63e-03 | 2.37e-02 | -2.16e-03 | -6.47e-03 | -7.17e-04 | -3.26e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.35e-02 | 6.26e-02 | -6.59e-04 | 1.26e-01 | 1.84e-01 | 5.84e-02 | 7.52e-02 | 1.99e-01 | 1.13e-03 | -2.23e-03 | 1.44e-02 | 8.75e-03 | -3.72e-04 | -1.72e-03 | ] |
| G [ | 3.79e-02 | -8.23e-04 | 1.11e-01 | 1.42e-04 | -3.58e-05 | 1.25e-04 | -3.70e-05 | -4.82e-05 | -1.41e-04 | 1.56e-02 | 6.55e-02 | -3.93e-04 | 1.87e-01 | 9.62e-02 | ] |
| T [ | -3.48e-03 | 1.12e-02 | -3.56e-03 | -1.67e-03 | -8.74e-04 | -4.10e-03 | 2.10e-02 | -4.08e-04 | 8.27e-02 | -5.02e-03 | -1.73e-03 | 2.89e-02 | -8.90e-04 | -2.01e-03 | ] |
| A [ | 4253 | 2202 | 3386 | 3439 | 444 | 14280 | 442 | 153 | 2522 | 15027 | 1339 | 5647 | 29 | 2824 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 12851 | 20178 | 1525 | 34827 | 40031 | 22654 | 24352 | 40777 | 3482 | 3626 | 14392 | 6086 | 25 | 2748 | ] |
| G [ | 20149 | 2270 | 30429 | 1835 | 186 | 1950 | 439 | 57 | 1411 | 16066 | 23139 | 1860 | 41121 | 31742 | ] |
| T [ | 4027 | 16630 | 5940 | 1179 | 619 | 2396 | 16047 | 293 | 33865 | 6561 | 2410 | 27687 | 105 | 3965 | ] |
