This page shows detailed deep learning-derived predictions and motifs for CTCF in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000606.1 |
| Cell line/tissue: | H1 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000AMF |
| Model: | BPNet |
| A [ | -1.65e-03 | -1.31e-03 | 1.84e-02 | -8.48e-04 | -2.97e-03 | 5.34e-02 | -3.53e-04 | 5.86e-03 | -4.62e-03 | -1.02e-03 | -2.01e-03 | -2.48e-03 | 4.96e-03 | -2.53e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 7.23e-02 | 1.30e-01 | 5.99e-04 | 3.77e-02 | 9.77e-03 | -4.44e-04 | -9.89e-05 | -1.88e-04 | -1.21e-04 | 5.33e-05 | 3.61e-03 | 5.38e-02 | 1.54e-03 | 2.26e-02 | ] |
| G [ | -1.30e-03 | -5.79e-04 | 5.15e-03 | 1.10e-02 | -1.41e-03 | 2.54e-03 | 1.37e-01 | 6.52e-02 | 4.32e-02 | 1.21e-01 | 7.05e-02 | 1.53e-03 | 3.99e-02 | 7.58e-03 | ] |
| T [ | -1.96e-03 | -8.72e-04 | -3.73e-03 | -1.70e-03 | 1.66e-02 | -1.86e-03 | -4.22e-04 | -7.48e-04 | 1.93e-03 | -7.54e-04 | -7.79e-04 | -2.29e-03 | -2.66e-03 | -2.57e-04 | ] |
| A [ | 4139 | 417 | 40161 | 3215 | 10016 | 47062 | 453 | 18832 | 6554 | 487 | 3168 | 9229 | 22823 | 7419 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 49842 | 58849 | 2111 | 33604 | 21699 | 1362 | 80 | 386 | 2081 | 411 | 4426 | 41440 | 5224 | 26036 | ] |
| G [ | 2648 | 35 | 5459 | 20528 | 4852 | 6068 | 58554 | 39318 | 30419 | 57700 | 45495 | 3036 | 26317 | 17976 | ] |
| T [ | 2753 | 80 | 11650 | 2035 | 22815 | 4890 | 294 | 845 | 20328 | 783 | 6292 | 5677 | 5017 | 7951 | ] |
