This page shows detailed deep learning-derived predictions and motifs for CTCF in PC-3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000608.1 |
| Cell line/tissue: | PC-3 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR359LOD |
| Model: | BPNet |
| A [ | -3.43e-04 | -2.96e-03 | -2.20e-03 | -5.57e-04 | -6.30e-04 | 5.37e-03 | -7.42e-04 | -3.69e-04 | -2.03e-03 | 1.80e-02 | -1.93e-03 | -4.49e-03 | -9.09e-04 | -2.15e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.62e-03 | 4.67e-02 | 2.25e-05 | 9.59e-02 | 1.43e-01 | 5.04e-02 | 7.44e-02 | 1.54e-01 | 1.07e-03 | -1.75e-03 | 1.11e-02 | 4.73e-03 | -5.77e-04 | -1.51e-03 | ] |
| G [ | 2.95e-02 | 4.17e-04 | 7.37e-02 | 1.37e-03 | -6.07e-05 | -3.73e-04 | -1.76e-04 | -6.29e-05 | -3.62e-04 | 1.26e-02 | 4.43e-02 | 1.07e-03 | 1.44e-01 | 7.50e-02 | ] |
| T [ | -2.60e-03 | 8.37e-03 | -2.97e-03 | -1.73e-03 | -8.98e-04 | -5.01e-03 | 1.09e-02 | -3.53e-04 | 6.45e-02 | -3.65e-03 | -1.13e-03 | 2.25e-02 | -1.21e-03 | -1.25e-03 | ] |
| A [ | 6679 | 3776 | 4641 | 4876 | 167 | 20493 | 506 | 32 | 3504 | 19993 | 1896 | 9078 | 132 | 3362 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 16486 | 22190 | 1983 | 44416 | 52571 | 26712 | 33145 | 52847 | 3879 | 4174 | 19242 | 5085 | 51 | 2648 | ] |
| G [ | 23675 | 3621 | 38527 | 2050 | 26 | 1355 | 235 | 7 | 1004 | 20083 | 28552 | 1972 | 52236 | 42003 | ] |
| T [ | 6126 | 23380 | 7815 | 1624 | 202 | 4406 | 19080 | 80 | 44580 | 8716 | 3276 | 36830 | 547 | 4953 | ] |
