This page shows detailed deep learning-derived predictions and motifs for CTCF in middle frontal area 46 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000613.1 |
| Cell line/tissue: | middle frontal area 46 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR699BRV |
| Model: | BPNet |
| A [ | -1.35e-03 | -4.09e-03 | -3.32e-03 | -4.63e-04 | -5.81e-04 | 7.21e-03 | -5.53e-04 | -3.64e-04 | -2.65e-03 | 2.05e-02 | -2.28e-03 | -6.43e-03 | -8.79e-04 | -3.33e-03 | -5.74e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.44e-02 | 6.17e-02 | -6.20e-04 | 1.24e-01 | 1.81e-01 | 6.09e-02 | 7.57e-02 | 1.93e-01 | 1.35e-03 | -2.08e-03 | 1.37e-02 | 9.53e-03 | -4.47e-04 | -1.67e-03 | 2.37e-02 | ] |
| G [ | 3.58e-02 | -5.08e-04 | 1.04e-01 | 4.33e-04 | 2.05e-05 | 5.90e-04 | -6.15e-06 | -4.18e-05 | 1.69e-05 | 1.63e-02 | 6.30e-02 | -3.38e-05 | 1.76e-01 | 9.10e-02 | -2.44e-03 | ] |
| T [ | -3.32e-03 | 1.06e-02 | -4.16e-03 | -1.70e-03 | -8.41e-04 | -4.56e-03 | 2.06e-02 | -3.67e-04 | 7.45e-02 | -4.80e-03 | -1.88e-03 | 2.56e-02 | -9.38e-04 | -1.49e-03 | 4.90e-03 | ] |
| A [ | 5167 | 2599 | 4094 | 4046 | 456 | 16612 | 622 | 228 | 3405 | 18107 | 1713 | 6976 | 428 | 3485 | 8816 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 15850 | 25324 | 1880 | 42321 | 48784 | 28001 | 29558 | 49448 | 4701 | 4784 | 17310 | 9483 | 503 | 3892 | 22168 | ] |
| G [ | 24419 | 2749 | 36894 | 2394 | 253 | 2526 | 754 | 90 | 1919 | 19406 | 27828 | 2807 | 47465 | 37684 | 6155 | ] |
| T [ | 4775 | 19539 | 7342 | 1449 | 717 | 3071 | 19276 | 444 | 40185 | 7913 | 3359 | 30944 | 1814 | 5149 | 13071 | ] |
