This page shows detailed deep learning-derived predictions and motifs for CTCF in kidney using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000614.1 |
| Cell line/tissue: | kidney |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DMC |
| Model: | BPNet |
| A [ | -2.10e-03 | -7.28e-04 | 2.88e-02 | -1.90e-03 | -6.06e-03 | 8.06e-02 | -4.63e-04 | 1.78e-02 | -4.00e-03 | -8.69e-04 | -1.56e-03 | -3.23e-03 | 7.30e-03 | -3.30e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.56e-02 | 1.95e-01 | -8.94e-04 | 6.68e-02 | 1.61e-02 | -9.28e-05 | -5.97e-05 | -1.57e-05 | -1.56e-05 | 8.81e-06 | 5.61e-04 | 9.98e-02 | -2.47e-04 | 3.43e-02 | ] |
| G [ | -1.71e-03 | -2.52e-04 | 6.88e-03 | 1.53e-02 | -1.94e-03 | 3.46e-04 | 1.97e-01 | 7.01e-02 | 5.63e-02 | 1.76e-01 | 1.14e-01 | -5.75e-04 | 5.84e-02 | 1.38e-02 | ] |
| T [ | -3.35e-03 | -4.85e-04 | -6.12e-03 | -2.32e-03 | 2.06e-02 | -2.58e-03 | -3.00e-04 | -4.97e-04 | 7.51e-03 | -5.31e-04 | -6.61e-04 | -3.92e-03 | -3.58e-03 | -1.59e-03 | ] |
| A [ | 3684 | 70 | 27182 | 2248 | 6295 | 32720 | 287 | 15156 | 2397 | 628 | 1289 | 5975 | 15911 | 4073 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 30814 | 39658 | 1744 | 22343 | 15901 | 1331 | 41 | 494 | 1754 | 252 | 2000 | 28559 | 2351 | 19339 | ] |
| G [ | 2624 | 19 | 5262 | 13928 | 3322 | 3180 | 39295 | 23593 | 21572 | 38363 | 33101 | 1695 | 19338 | 12271 | ] |
| T [ | 2638 | 13 | 5572 | 1241 | 14241 | 2529 | 137 | 516 | 14038 | 517 | 3371 | 3531 | 2160 | 4077 | ] |
