Detailed information of deep learning profile BP000616.1

This page shows detailed deep learning-derived predictions and motifs for TFAP2B in SK-N-SH using a single trained BPNet model.

Model details

Name: TFAP2B
Model ID: BP000616.1
Cell line/tissue: SK-N-SH
Class: Basic helix-span-helix factors (bHSH)
Family: AP-2
Best Match(es): MA0812.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q92481  
Source: ENCSR630GGD
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.39e-03 -6.24e-04 -7.77e-07 4.86e-05 -1.94e-03 -1.14e-03 1.38e-02 1.26e-03 1.75e-07 -8.31e-04 ]
C [ 2.55e-03 4.31e-02 1.24e-01 7.64e-02 7.84e-03 1.18e-02 8.51e-04 2.93e-08 -3.80e-08 4.39e-02 ]
G [ 2.29e-02 1.38e-02 5.59e-07 1.02e-06 2.23e-03 1.29e-02 9.85e-03 1.03e-01 1.21e-01 8.87e-03 ]
T [ -1.27e-03 -6.98e-04 2.27e-06 4.52e-03 1.11e-02 -2.02e-03 -1.24e-03 0.00e+00 0.00e+00 -5.08e-04 ]

Frequency matrix

A [ 37327 7611 12 2382 14096 20148 96652 6478 67 8628 ]
C [ 43161 106477 200597 156947 68103 83483 27128 46 19 147462 ]
G [ 82007 74662 28 938 38194 79169 61461 194253 200706 39905 ]
T [ 38308 12053 166 40536 80409 18003 15561 26 11 4807 ]