This page shows detailed deep learning-derived predictions and motifs for CTCF in epithelial cell of prostate using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000618.1 |
| Cell line/tissue: | epithelial cell of prostate |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR196HOM |
| Model: | BPNet |
| A [ | -1.50e-03 | -1.16e-03 | 1.90e-02 | -1.11e-03 | -3.03e-03 | 5.12e-02 | -3.43e-04 | 9.86e-03 | -4.57e-03 | -9.66e-04 | -1.80e-03 | -2.10e-03 | 7.01e-03 | -2.10e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 6.73e-02 | 1.25e-01 | 8.46e-04 | 4.10e-02 | 1.12e-02 | -1.82e-04 | -2.79e-06 | -1.54e-04 | -1.59e-05 | -7.37e-06 | 1.91e-03 | 6.07e-02 | 6.73e-04 | 2.53e-02 | ] |
| G [ | -1.20e-03 | -4.57e-04 | 4.83e-03 | 1.01e-02 | -1.14e-03 | 1.24e-03 | 1.31e-01 | 6.09e-02 | 3.69e-02 | 1.20e-01 | 7.75e-02 | 3.24e-04 | 4.09e-02 | 7.15e-03 | ] |
| T [ | -1.71e-03 | -8.48e-04 | -4.08e-03 | -1.78e-03 | 1.53e-02 | -1.59e-03 | -3.54e-04 | -6.60e-04 | 5.69e-03 | -6.95e-04 | -6.52e-04 | -1.92e-03 | -2.76e-03 | -4.32e-04 | ] |
| A [ | 5321 | 14 | 37302 | 3807 | 8948 | 46948 | 5 | 20390 | 4811 | 642 | 1670 | 10191 | 22653 | 6951 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 44136 | 56417 | 2083 | 28029 | 22607 | 1260 | 1 | 420 | 2020 | 132 | 2153 | 38285 | 3844 | 24785 | ] |
| G [ | 3397 | 0 | 6598 | 22421 | 5259 | 4408 | 56422 | 34967 | 30001 | 55163 | 49374 | 2312 | 26001 | 17552 | ] |
| T [ | 3578 | 1 | 10448 | 2176 | 19618 | 3816 | 4 | 655 | 19601 | 495 | 3236 | 5644 | 3934 | 7144 | ] |
