This page shows detailed deep learning-derived predictions and motifs for CTCF in middle frontal area 46 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000619.1 |
| Cell line/tissue: | middle frontal area 46 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR211AFA |
| Model: | BPNet |
| A [ | -2.25e-03 | -9.29e-04 | 2.51e-02 | -2.55e-03 | -6.46e-03 | 7.35e-02 | -4.92e-04 | 2.08e-02 | -4.52e-03 | -8.16e-04 | -1.54e-03 | -4.17e-03 | 1.08e-02 | -3.31e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.52e-02 | 1.89e-01 | -3.26e-04 | 6.79e-02 | 1.94e-02 | 6.18e-05 | -3.27e-05 | 2.46e-05 | 6.10e-04 | -2.11e-05 | -2.70e-04 | 1.11e-01 | -1.21e-03 | 3.62e-02 | ] |
| G [ | -1.59e-03 | -3.75e-04 | 8.32e-03 | 1.56e-02 | -1.93e-03 | 1.08e-03 | 1.93e-01 | 7.54e-02 | 5.83e-02 | 1.87e-01 | 1.31e-01 | -1.09e-03 | 6.22e-02 | 1.65e-02 | ] |
| T [ | -3.28e-03 | -6.88e-04 | -7.42e-03 | -2.35e-03 | 1.92e-02 | -3.04e-03 | -3.23e-04 | -5.67e-04 | 6.84e-03 | -6.33e-04 | -4.45e-04 | -3.68e-03 | -4.31e-03 | -2.27e-03 | ] |
| A [ | 4013 | 9 | 25940 | 2329 | 6127 | 31349 | 368 | 15661 | 2217 | 494 | 528 | 4618 | 16326 | 3537 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 28679 | 38266 | 1649 | 20677 | 15291 | 1349 | 80 | 420 | 1820 | 101 | 748 | 30161 | 1503 | 18597 | ] |
| G [ | 2790 | 3 | 5508 | 14012 | 3383 | 3148 | 37664 | 21865 | 19943 | 37414 | 34166 | 823 | 18588 | 12635 | ] |
| T [ | 2797 | 1 | 5181 | 1262 | 13478 | 2433 | 167 | 333 | 14299 | 270 | 2836 | 2677 | 1862 | 3509 | ] |
