Detailed information of deep learning profile BP000620.1

This page shows detailed deep learning-derived predictions and motifs for MEIS1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MEIS1
Model ID: BP000620.1
Cell line/tissue: HepG2
Class: Homeo domain factors
Family: TALE-type homeo domain factors
Best Match(es): MA0498.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q60954  
Source: ENCSR695WOH
Model: BPNet

Contribution weight matrix (CWM)

A [ -3.75e-04 2.47e-03 -4.08e-04 -1.30e-05 1.08e-05 1.08e-02 5.98e-06 4.91e-03 -3.79e-05 -4.69e-04 -7.17e-04 -3.26e-04 ]
C [ 1.10e-03 2.70e-04 1.17e-03 7.05e-06 -3.43e-06 -3.88e-06 2.09e-02 1.92e-04 3.20e-04 1.28e-03 1.54e-03 1.88e-03 ]
G [ 3.68e-03 2.25e-03 2.07e-04 -1.17e-06 1.88e-02 -6.45e-06 0.00e+00 6.22e-05 6.06e-03 1.07e-03 4.83e-04 1.56e-03 ]
T [ -6.50e-05 -5.97e-04 4.02e-03 1.15e-02 -2.77e-05 5.57e-05 5.49e-05 -1.71e-04 -2.75e-04 1.23e-04 5.76e-04 -7.68e-04 ]

Frequency matrix

A [ 5540 7874 3616 414 22 20057 0 16967 3189 6092 4792 5496 ]
C [ 6918 4629 5787 82 3 225 24322 3696 4213 6063 6033 6164 ]
G [ 6508 6662 5781 1651 24269 462 0 614 11217 5641 6098 7452 ]
T [ 5356 5157 9139 22175 28 3577 0 3046 5703 6526 7399 5211 ]

1 profiles found for the same TF (MEIS1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000893.1 MEIS1 ENCSR186JMM HEK293 Homo sapiens
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