Detailed information of deep learning profile BP000621.1

This page shows detailed deep learning-derived predictions and motifs for FOXA1 in T47D using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOXA1
Model ID: BP000621.1
Cell line/tissue: T47D
Class: Fork head/winged helix factors
Family: FOX
Best Match(es): MA0148.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P55317  
Source: ENCSR000BKY
Model: BPNet

Contribution weight matrix (CWM)

A [ 4.56e-03 1.15e-02 4.40e-03 1.59e-03 -9.98e-05 5.88e-02 5.74e-02 7.60e-02 0.00e+00 5.32e-02 ]
C [ -2.30e-04 -6.94e-04 -1.11e-04 -3.66e-05 8.71e-03 5.33e-03 2.22e-03 -8.39e-06 8.23e-02 -1.15e-04 ]
G [ -7.54e-04 6.64e-03 -6.32e-04 5.47e-02 -7.31e-06 -1.60e-06 1.44e-06 -7.86e-06 0.00e+00 -2.44e-05 ]
T [ 1.26e-02 -1.26e-03 9.47e-03 -1.18e-04 6.04e-02 -3.11e-06 -5.96e-05 -6.88e-06 1.33e-04 -4.14e-04 ]

Frequency matrix

A [ 33959 38259 36198 15881 2857 72260 75232 88486 0 79291 ]
C [ 11100 14619 4123 2060 18944 16846 12191 282 90760 2432 ]
G [ 8307 24538 16104 67292 1320 621 791 1506 1 1647 ]
T [ 37417 13366 34358 5550 67662 1056 2569 509 22 7413 ]

Alternative motif patterns (AMPs)

11 profiles found for the same TF (FOXA1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP001104.1 FOXA1 ENCSR865RXA HepG2 Homo sapiens
Showing 1 profiles of page 2 from 2 pages