This page shows detailed deep learning-derived predictions and motifs for CTCF in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000625.1 |
| Cell line/tissue: | MCF-7 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DML |
| Model: | BPNet |
| A [ | -3.58e-03 | -1.91e-03 | 1.21e-02 | -2.47e-03 | -5.74e-03 | 4.18e-02 | -7.21e-04 | 5.79e-03 | -6.83e-03 | -1.18e-03 | -2.05e-03 | -5.97e-03 | 1.09e-03 | -4.12e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.43e-02 | 1.57e-01 | 2.05e-03 | 5.14e-02 | 2.16e-02 | 1.65e-04 | 4.09e-05 | -2.55e-05 | 2.01e-04 | 1.16e-04 | 1.85e-03 | 9.57e-02 | 1.35e-03 | 4.14e-02 | ] |
| G [ | -1.05e-04 | -5.17e-05 | 6.91e-03 | 1.71e-02 | 1.11e-04 | 2.67e-03 | 1.64e-01 | 8.14e-02 | 5.07e-02 | 1.56e-01 | 1.10e-01 | 1.68e-04 | 6.13e-02 | 1.22e-02 | ] |
| T [ | -3.67e-03 | -1.08e-03 | -8.11e-03 | -2.33e-03 | 7.23e-03 | -2.87e-03 | -6.03e-04 | -8.47e-04 | 2.38e-03 | -8.84e-04 | -1.58e-03 | -3.73e-03 | -4.81e-03 | -2.42e-03 | ] |
| A [ | 5562 | 783 | 35609 | 4417 | 9617 | 43976 | 737 | 17442 | 5803 | 935 | 1961 | 9167 | 20568 | 5884 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 46380 | 60503 | 4964 | 30774 | 27095 | 3047 | 317 | 928 | 3876 | 395 | 3586 | 45487 | 4876 | 32051 | ] |
| G [ | 6121 | 633 | 9929 | 24601 | 8279 | 8143 | 60670 | 42851 | 32258 | 60083 | 52275 | 2653 | 32745 | 17637 | ] |
| T [ | 4216 | 359 | 11776 | 2486 | 17288 | 7113 | 554 | 1057 | 20340 | 865 | 4455 | 4971 | 4089 | 6705 | ] |
