This page shows detailed deep learning-derived predictions and motifs for CTCF in 22Rv1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000626.1 |
| Cell line/tissue: | 22Rv1 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 MA1929.1 MA1930.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR847XGE |
| Model: | BPNet |
| A [ | -5.09e-04 | -2.16e-03 | -1.85e-03 | -1.96e-04 | -4.18e-04 | 4.99e-03 | -4.94e-04 | -2.56e-04 | -1.33e-03 | 1.37e-02 | -1.48e-03 | -4.10e-03 | -8.28e-04 | -1.67e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 7.06e-03 | 4.27e-02 | -7.40e-05 | 7.14e-02 | 1.06e-01 | 3.39e-02 | 4.97e-02 | 1.08e-01 | 3.57e-04 | -1.69e-03 | 7.21e-03 | 4.51e-03 | -4.78e-04 | -1.40e-03 | ] |
| G [ | 2.44e-02 | 4.26e-05 | 6.24e-02 | 1.04e-03 | -7.00e-05 | -9.18e-05 | -1.61e-04 | -4.09e-05 | -1.58e-04 | 9.15e-03 | 3.43e-02 | 8.83e-04 | 1.03e-01 | 5.45e-02 | ] |
| T [ | -1.93e-03 | 5.23e-03 | -2.39e-03 | -1.28e-03 | -5.12e-04 | -3.67e-03 | 9.25e-03 | -2.09e-04 | 4.80e-02 | -2.71e-03 | -1.03e-03 | 1.56e-02 | -9.32e-04 | -1.09e-03 | ] |
| A [ | 6161 | 2949 | 4874 | 4427 | 540 | 18877 | 765 | 110 | 3495 | 21144 | 1712 | 8967 | 451 | 3774 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 15453 | 28753 | 2017 | 46713 | 54189 | 31058 | 33715 | 55420 | 4339 | 5123 | 20112 | 8368 | 435 | 3764 | ] |
| G [ | 28401 | 3245 | 40057 | 2918 | 245 | 2086 | 504 | 60 | 1707 | 21117 | 30229 | 2669 | 53664 | 42855 | ] |
| T [ | 5749 | 20816 | 8816 | 1706 | 790 | 3743 | 20779 | 174 | 46224 | 8380 | 3711 | 35760 | 1214 | 5370 | ] |
