Detailed information of deep learning profile BP000628.1

This page shows detailed deep learning-derived predictions and motifs for EGR1 in liver using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: EGR1
Model ID: BP000628.1
Cell line/tissue: liver
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Best Match(es): MA0162.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P18146  
Source: ENCSR736BUG
Model: BPNet

Contribution weight matrix (CWM)

A [ -5.80e-05 -4.96e-04 9.04e-06 -2.13e-05 1.63e-04 1.55e-05 0.00e+00 -6.26e-04 -1.53e-04 -4.56e-04 ]
C [ 1.01e-04 2.93e-02 1.07e-05 3.31e-06 4.86e-06 0.00e+00 2.90e-05 2.29e-02 -1.04e-05 -3.29e-04 ]
G [ 2.59e-02 -5.66e-05 5.44e-02 9.02e-03 3.83e-02 5.28e-02 5.44e-02 3.96e-06 4.23e-02 1.57e-02 ]
T [ -1.01e-04 -7.41e-04 -5.09e-06 1.52e-02 -1.21e-05 5.53e-07 0.00e+00 6.60e-04 -1.52e-04 1.41e-03 ]

Frequency matrix

A [ 2288 4261 791 916 1652 120 26 3455 662 962 ]
C [ 3117 10270 531 1944 845 274 245 13780 251 1374 ]
G [ 14774 3638 19591 12800 18379 20534 20713 958 19803 16521 ]
T [ 819 2830 85 5338 122 70 14 2804 282 2141 ]

10 profiles found for the same TF (EGR1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000330.1 EGR1 ENCSR024CNP K562 Homo sapiens
BP000348.1 EGR1 ENCSR000BMQ GM12878 Homo sapiens
BP000440.1 EGR1 ENCSR000BRZ HCT116 Homo sapiens
BP000470.1 EGR1 ENCSR026GSW HepG2 Homo sapiens
BP000507.1 EGR1 ENCSR211LTF K562 Homo sapiens
BP000635.1 EGR1 ENCSR000BUX MCF-7 Homo sapiens
BP000770.1 EGR1 ENCSR000BNE K562 Homo sapiens
BP000794.1 EGR1 ENCSR000BJA H1 Homo sapiens
BP001030.1 EGR1 ENCSR290ZOS liver Homo sapiens
BP001164.1 EGR1 ENCSR000BSQ Ishikawa Homo sapiens
Showing 10 profiles of page 1 from 1 pages
  • 1 (current)