This page shows detailed deep learning-derived predictions and motifs for SRF in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | SRF |
| Model ID: | BP000629.1 |
| Cell line/tissue: | K562 |
| Class: | MADS box factors |
| Family: | Responders to external signals (SRF/RLM1) |
| Best Match(es): | MA0083.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P11831 |
| Source: | ENCSR000BLK |
| Model: | BPNet |
| A [ | -2.78e-05 | 0.00e+00 | 6.78e-03 | 1.93e-03 | 5.20e-02 | 6.13e-04 | 3.36e-02 | 3.26e-03 | 6.96e-04 | -1.54e-04 | -3.40e-03 | -7.56e-04 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.09e-01 | 1.15e-01 | -2.85e-03 | -2.90e-04 | -2.96e-04 | -2.76e-04 | -2.33e-04 | -3.73e-05 | 8.63e-06 | -4.49e-05 | 4.42e-03 | 2.04e-02 | ] |
| G [ | -6.87e-05 | 1.89e-05 | 4.44e-06 | -1.25e-04 | -9.26e-04 | -2.56e-05 | -3.08e-04 | -3.06e-04 | 9.31e-02 | 1.07e-01 | 4.28e-03 | 3.27e-04 | ] |
| T [ | -2.48e-05 | 1.37e-04 | 1.20e-02 | 4.86e-02 | 2.96e-03 | 6.83e-02 | 1.10e-02 | 2.81e-02 | 1.12e-05 | -7.35e-05 | 2.02e-03 | -1.29e-03 | ] |
