This page shows detailed deep learning-derived predictions and motifs for CTCF in middle frontal area 46 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000631.1 |
| Cell line/tissue: | middle frontal area 46 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR913SEI |
| Model: | BPNet |
| A [ | -1.50e-03 | -3.59e-03 | -3.41e-03 | -6.29e-04 | -5.26e-04 | 6.35e-03 | -5.01e-04 | -3.20e-04 | -2.52e-03 | 2.04e-02 | -2.05e-03 | -6.14e-03 | -6.51e-04 | -3.05e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.34e-02 | 6.05e-02 | -6.69e-04 | 1.19e-01 | 1.82e-01 | 5.90e-02 | 7.51e-02 | 1.86e-01 | 9.16e-04 | -2.16e-03 | 1.24e-02 | 7.54e-03 | -3.49e-04 | -1.75e-03 | ] |
| G [ | 3.40e-02 | -5.19e-04 | 1.01e-01 | 4.11e-04 | -4.55e-05 | 1.58e-04 | -9.02e-05 | -4.56e-05 | -9.25e-05 | 1.72e-02 | 6.74e-02 | -8.03e-05 | 1.76e-01 | 9.38e-02 | ] |
| T [ | -3.12e-03 | 1.01e-02 | -3.33e-03 | -1.41e-03 | -6.71e-04 | -3.96e-03 | 1.77e-02 | -3.97e-04 | 7.66e-02 | -5.43e-03 | -2.20e-03 | 2.58e-02 | -8.88e-04 | -1.91e-03 | ] |
| A [ | 3362 | 1664 | 2940 | 2745 | 215 | 13233 | 299 | 174 | 2205 | 13370 | 1143 | 4640 | 70 | 2447 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 11305 | 17972 | 896 | 31785 | 35475 | 19532 | 21153 | 35581 | 2849 | 2954 | 12126 | 5089 | 61 | 2260 | ] |
| G [ | 17946 | 1526 | 27382 | 890 | 63 | 1443 | 296 | 67 | 1156 | 14049 | 20847 | 1577 | 35748 | 28028 | ] |
| T [ | 3514 | 14965 | 4909 | 708 | 374 | 1919 | 14379 | 305 | 29917 | 5754 | 2011 | 24821 | 248 | 3391 | ] |
