This page shows detailed deep learning-derived predictions and motifs for CTCF in middle frontal area 46 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000634.1 |
| Cell line/tissue: | middle frontal area 46 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR372JWF |
| Model: | BPNet |
| A [ | -2.11e-03 | -1.20e-03 | 3.02e-02 | -2.58e-03 | -6.10e-03 | 7.72e-02 | -4.19e-04 | 2.27e-02 | -4.68e-03 | -8.71e-04 | -1.72e-03 | -3.83e-03 | 1.11e-02 | -3.74e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.70e-02 | 1.90e-01 | -6.11e-04 | 6.61e-02 | 1.74e-02 | -8.87e-05 | -5.05e-05 | -7.38e-05 | 1.65e-04 | -3.50e-05 | -1.49e-05 | 1.12e-01 | -8.57e-04 | 4.09e-02 | ] |
| G [ | -2.07e-03 | -4.21e-04 | 8.69e-03 | 1.46e-02 | -2.39e-03 | 9.03e-04 | 2.02e-01 | 7.80e-02 | 6.11e-02 | 1.96e-01 | 1.36e-01 | -9.77e-04 | 6.49e-02 | 1.55e-02 | ] |
| T [ | -3.40e-03 | -8.55e-04 | -7.27e-03 | -2.42e-03 | 2.07e-02 | -3.17e-03 | -4.16e-04 | -6.24e-04 | 9.52e-03 | -6.50e-04 | -3.17e-04 | -3.98e-03 | -4.48e-03 | -2.00e-03 | ] |
| A [ | 3962 | 341 | 27817 | 2312 | 6467 | 33541 | 254 | 17121 | 2052 | 552 | 1001 | 5734 | 17406 | 3870 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 30875 | 39562 | 1543 | 22620 | 15301 | 1048 | 29 | 343 | 1198 | 122 | 1470 | 29684 | 1880 | 19403 | ] |
| G [ | 2417 | 63 | 5262 | 13802 | 3060 | 3073 | 39647 | 22196 | 21965 | 39019 | 34125 | 1247 | 18657 | 12763 | ] |
| T [ | 2796 | 85 | 5428 | 1317 | 15223 | 2388 | 121 | 391 | 14836 | 358 | 3454 | 3385 | 2108 | 4015 | ] |
