Detailed information of deep learning profile BP000635.1

This page shows detailed deep learning-derived predictions and motifs for EGR1 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: EGR1
Model ID: BP000635.1
Cell line/tissue: MCF-7
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Best Match(es): MA0162.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P18146  
Source: ENCSR000BUX
Model: BPNet

Contribution weight matrix (CWM)

A [ 1.09e-03 -3.10e-04 1.64e-03 -4.60e-07 2.11e-06 -2.20e-05 1.64e-02 -3.22e-06 -8.57e-04 -2.22e-04 ]
C [ 1.30e-02 4.45e-02 3.04e-05 6.70e-02 4.79e-02 4.13e-02 4.89e-03 6.66e-02 2.75e-05 2.52e-02 ]
G [ -1.28e-04 -7.24e-05 2.55e-02 1.96e-05 5.71e-05 2.86e-05 8.98e-05 2.44e-05 2.45e-02 -1.69e-04 ]
T [ -8.55e-04 -2.74e-04 -1.36e-03 3.63e-06 1.11e-05 2.87e-04 -3.48e-05 -3.08e-07 -1.41e-03 9.28e-05 ]

Frequency matrix

A [ 4217 723 5532 6 198 196 11075 25 5073 1359 ]
C [ 18880 24919 756 27368 26421 23432 13353 27235 3412 18395 ]
G [ 2353 604 17288 61 635 739 2196 90 13992 4331 ]
T [ 1991 1196 3866 7 188 3075 819 92 4965 3358 ]

Other motif patterns

10 profiles found for the same TF (EGR1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000330.1 EGR1 ENCSR024CNP K562 Homo sapiens
BP000348.1 EGR1 ENCSR000BMQ GM12878 Homo sapiens
BP000440.1 EGR1 ENCSR000BRZ HCT116 Homo sapiens
BP000470.1 EGR1 ENCSR026GSW HepG2 Homo sapiens
BP000507.1 EGR1 ENCSR211LTF K562 Homo sapiens
BP000628.1 EGR1 ENCSR736BUG liver Homo sapiens
BP000770.1 EGR1 ENCSR000BNE K562 Homo sapiens
BP000794.1 EGR1 ENCSR000BJA H1 Homo sapiens
BP001030.1 EGR1 ENCSR290ZOS liver Homo sapiens
BP001164.1 EGR1 ENCSR000BSQ Ishikawa Homo sapiens
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