Detailed information of deep learning profile BP000635.1

This page shows detailed deep learning-derived predictions and motifs for EGR1 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: EGR1
Model ID: BP000635.1
Cell line/tissue: MCF-7
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Best Match(es): MA0162.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P18146  
Source: ENCSR000BUX
Model: BPNet

Contribution weight matrix (CWM)

A [ 9.28e-05 -1.41e-03 -3.08e-07 -3.48e-05 2.87e-04 1.11e-05 3.63e-06 -1.36e-03 -2.74e-04 -8.55e-04 ]
C [ -1.69e-04 2.45e-02 2.44e-05 8.98e-05 2.86e-05 5.71e-05 1.96e-05 2.55e-02 -7.24e-05 -1.28e-04 ]
G [ 2.52e-02 2.75e-05 6.66e-02 4.89e-03 4.13e-02 4.79e-02 6.70e-02 3.04e-05 4.45e-02 1.30e-02 ]
T [ -2.22e-04 -8.57e-04 -3.22e-06 1.64e-02 -2.20e-05 2.11e-06 -4.60e-07 1.64e-03 -3.10e-04 1.09e-03 ]

Frequency matrix

A [ 3358 4965 92 819 3075 188 7 3866 1196 1991 ]
C [ 4331 13992 90 2196 739 635 61 17288 604 2353 ]
G [ 18395 3412 27235 13353 23432 26421 27368 756 24919 18880 ]
T [ 1359 5073 25 11075 196 198 6 5532 723 4217 ]

Other motif patterns

10 profiles found for the same TF (EGR1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000330.1 EGR1 ENCSR024CNP K562 Homo sapiens
BP000348.1 EGR1 ENCSR000BMQ GM12878 Homo sapiens
BP000440.1 EGR1 ENCSR000BRZ HCT116 Homo sapiens
BP000470.1 EGR1 ENCSR026GSW HepG2 Homo sapiens
BP000507.1 EGR1 ENCSR211LTF K562 Homo sapiens
BP000628.1 EGR1 ENCSR736BUG liver Homo sapiens
BP000770.1 EGR1 ENCSR000BNE K562 Homo sapiens
BP000794.1 EGR1 ENCSR000BJA H1 Homo sapiens
BP001030.1 EGR1 ENCSR290ZOS liver Homo sapiens
BP001164.1 EGR1 ENCSR000BSQ Ishikawa Homo sapiens
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