This page shows detailed deep learning-derived predictions and motifs for CTCF in GM12864 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000640.1 |
| Cell line/tissue: | GM12864 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DRB |
| Model: | BPNet |
| A [ | -1.95e-03 | -1.22e-03 | 2.35e-02 | -1.73e-03 | -4.63e-03 | 7.62e-02 | -4.92e-04 | 9.19e-03 | -5.28e-03 | -1.12e-03 | -2.64e-03 | -3.61e-03 | 5.25e-03 | -2.86e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.02e-01 | 1.77e-01 | 5.06e-04 | 6.26e-02 | 1.47e-02 | -3.79e-04 | -1.11e-04 | -1.64e-04 | -2.14e-04 | -1.66e-04 | 2.23e-03 | 8.01e-02 | 1.08e-03 | 2.89e-02 | ] |
| G [ | -1.68e-03 | -4.46e-04 | 5.99e-03 | 1.19e-02 | -1.96e-03 | 1.64e-03 | 1.83e-01 | 8.18e-02 | 6.10e-02 | 1.65e-01 | 9.74e-02 | 7.28e-04 | 4.82e-02 | 8.77e-03 | ] |
| T [ | -3.07e-03 | -8.51e-04 | -6.48e-03 | -2.20e-03 | 2.10e-02 | -2.38e-03 | -3.36e-04 | -7.32e-04 | 4.36e-03 | -9.24e-04 | -6.55e-04 | -3.55e-03 | -3.44e-03 | -4.52e-04 | ] |
| A [ | 4968 | 1360 | 34969 | 3611 | 8261 | 45054 | 452 | 18251 | 3888 | 691 | 2379 | 8762 | 20117 | 6267 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 43610 | 53076 | 3267 | 31021 | 21729 | 1668 | 116 | 628 | 2250 | 367 | 3883 | 38132 | 4745 | 26625 | ] |
| G [ | 3535 | 480 | 8249 | 18945 | 4780 | 4922 | 54538 | 35582 | 31915 | 53494 | 44258 | 3076 | 26633 | 15834 | ] |
| T [ | 3263 | 460 | 8891 | 1799 | 20606 | 3732 | 270 | 915 | 17323 | 824 | 4856 | 5405 | 3880 | 6649 | ] |
