This page shows detailed deep learning-derived predictions and motifs for CTCF in sigmoid colon using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000644.1 |
| Cell line/tissue: | sigmoid colon |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR222SQE |
| Model: | BPNet |
| A [ | -8.28e-04 | -3.01e-04 | 1.86e-02 | -7.75e-04 | -2.86e-03 | 4.85e-02 | -2.21e-04 | 1.17e-02 | -1.52e-03 | -3.40e-04 | -5.85e-04 | -1.17e-03 | 4.54e-03 | -1.22e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 5.28e-02 | 1.01e-01 | -6.11e-04 | 3.57e-02 | 9.09e-03 | -1.35e-04 | -2.51e-05 | -4.39e-05 | -1.25e-04 | -4.86e-05 | -2.90e-05 | 4.82e-02 | -3.16e-04 | 1.37e-02 | ] |
| G [ | -9.15e-04 | -8.77e-05 | 4.27e-03 | 7.48e-03 | -1.38e-03 | 1.82e-04 | 9.51e-02 | 3.61e-02 | 2.67e-02 | 8.57e-02 | 5.55e-02 | -2.75e-04 | 2.80e-02 | 7.21e-03 | ] |
| T [ | -1.43e-03 | -2.10e-04 | -2.52e-03 | -8.93e-04 | 1.11e-02 | -1.11e-03 | -1.25e-04 | -1.93e-04 | 3.95e-03 | -2.22e-04 | -2.61e-04 | -1.50e-03 | -1.23e-03 | -7.25e-04 | ] |
| A [ | 2384 | 425 | 18621 | 1326 | 4058 | 22843 | 228 | 10696 | 1361 | 178 | 693 | 3767 | 10849 | 2683 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 21121 | 25895 | 1043 | 15689 | 11194 | 715 | 43 | 191 | 925 | 25 | 875 | 19773 | 1234 | 13008 | ] |
| G [ | 1485 | 101 | 3784 | 8842 | 1964 | 1788 | 26160 | 15392 | 14692 | 26241 | 22920 | 790 | 13193 | 8499 | ] |
| T [ | 1541 | 111 | 3084 | 675 | 9315 | 1186 | 101 | 253 | 9555 | 88 | 2044 | 2201 | 1256 | 2342 | ] |
