This page shows detailed deep learning-derived predictions and motifs for CTCF in prostate gland using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000645.1 |
| Cell line/tissue: | prostate gland |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR946MNG |
| Model: | BPNet |
| A [ | -1.19e-03 | -2.38e-03 | -2.59e-03 | -6.59e-04 | -3.51e-04 | 6.16e-03 | -2.94e-04 | -2.17e-04 | -1.70e-03 | 1.58e-02 | -1.39e-03 | -4.53e-03 | -3.60e-04 | -2.40e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.10e-02 | 5.04e-02 | -6.72e-04 | 9.88e-02 | 1.43e-01 | 4.29e-02 | 5.93e-02 | 1.52e-01 | 2.24e-04 | -1.95e-03 | 1.01e-02 | 6.09e-03 | -2.02e-04 | -1.47e-03 | ] |
| G [ | 2.78e-02 | -7.28e-04 | 8.07e-02 | -7.83e-05 | -7.97e-06 | -9.25e-06 | -5.52e-05 | -3.76e-05 | -2.01e-04 | 1.64e-02 | 5.99e-02 | -4.92e-04 | 1.53e-01 | 8.16e-02 | ] |
| T [ | -2.46e-03 | 7.52e-03 | -2.53e-03 | -9.07e-04 | -5.12e-04 | -2.46e-03 | 1.75e-02 | -2.59e-04 | 7.09e-02 | -4.82e-03 | -1.56e-03 | 2.58e-02 | -4.67e-04 | -1.47e-03 | ] |
| A [ | 2562 | 1194 | 2364 | 2206 | 195 | 10947 | 204 | 111 | 1488 | 10293 | 803 | 3460 | 6 | 1775 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9275 | 15188 | 767 | 26012 | 28991 | 15850 | 17582 | 29167 | 2068 | 2438 | 10139 | 4281 | 11 | 1765 | ] |
| G [ | 14842 | 1066 | 22600 | 742 | 70 | 1270 | 246 | 59 | 969 | 12277 | 17119 | 1142 | 29496 | 23253 | ] |
| T [ | 2863 | 12094 | 3811 | 582 | 286 | 1475 | 11510 | 205 | 25016 | 4534 | 1481 | 20658 | 29 | 2748 | ] |
