Detailed information of deep learning profile BP000649.1

This page shows detailed deep learning-derived predictions and motifs for ESRRA in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ESRRA
Model ID: BP000649.1
Cell line/tissue: GM12878
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0592.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: O08580  
Source: ENCSR000DYQ
Model: BPNet

Contribution weight matrix (CWM)

A [ -7.71e-05 7.87e-05 4.32e-02 5.05e-06 -6.48e-05 0.00e+00 -5.73e-05 -2.49e-04 1.03e-02 ]
C [ 4.94e-04 1.92e-04 1.30e-04 6.81e-02 4.26e-02 -3.23e-05 7.55e-04 1.28e-03 -3.76e-04 ]
G [ -3.46e-05 3.86e-02 -3.11e-05 4.74e-06 4.56e-05 3.14e-06 -5.14e-05 1.59e-02 1.47e-03 ]
T [ 4.09e-02 -1.23e-05 -2.94e-04 0.00e+00 -3.36e-05 5.25e-02 4.15e-02 3.04e-04 -9.18e-04 ]

Frequency matrix

A [ 117 650 4858 50 212 6 209 518 2297 ]
C [ 238 699 521 5768 5046 191 878 1246 942 ]
G [ 124 4327 87 14 146 34 84 2752 1754 ]
T [ 5353 156 366 0 428 5601 4661 1316 839 ]

Other motif patterns

4 profiles found for the same TF (ESRRA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000715.1 ESRRA ENCSR954WVZ MCF-7 Homo sapiens
BP000765.1 ESRRA ENCSR029OPK WTC11 Homo sapiens
BP000860.1 ESRRA ENCSR486IFJ K562 Homo sapiens
BP001121.1 ESRRA ENCSR267NVP HepG2 Homo sapiens
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