This page shows detailed deep learning-derived predictions and motifs for CTCF in 22Rv1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000658.1 |
| Cell line/tissue: | 22Rv1 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR857PBV |
| Model: | BPNet |
| A [ | -8.95e-04 | -8.73e-04 | 1.56e-02 | -1.06e-03 | -2.64e-03 | 4.69e-02 | -2.10e-04 | 7.74e-03 | -3.60e-03 | -6.93e-04 | -1.31e-03 | -1.81e-03 | 5.54e-03 | -1.75e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 5.42e-02 | 1.02e-01 | 7.24e-04 | 3.33e-02 | 9.70e-03 | -2.20e-04 | -8.70e-05 | -1.51e-04 | -1.14e-04 | -2.40e-05 | 1.58e-03 | 5.86e-02 | 3.98e-04 | 2.24e-02 | ] |
| G [ | -1.42e-03 | -3.76e-04 | 4.08e-03 | 7.58e-03 | -1.43e-03 | 5.53e-04 | 1.07e-01 | 5.01e-02 | 3.56e-02 | 1.03e-01 | 6.87e-02 | 3.16e-04 | 3.93e-02 | 6.52e-03 | ] |
| T [ | -1.55e-03 | -7.15e-04 | -3.85e-03 | -1.35e-03 | 1.23e-02 | -1.31e-03 | -3.38e-04 | -4.76e-04 | 4.43e-03 | -4.71e-04 | -2.38e-04 | -2.03e-03 | -2.18e-03 | -1.49e-04 | ] |
| A [ | 5090 | 7 | 38265 | 3535 | 8701 | 46057 | 385 | 20231 | 4081 | 847 | 2044 | 9161 | 22186 | 6118 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 44124 | 56159 | 2270 | 30038 | 21461 | 1513 | 70 | 426 | 2102 | 286 | 3215 | 39442 | 3863 | 26776 | ] |
| G [ | 3342 | 1 | 6096 | 20725 | 5081 | 4735 | 55487 | 34784 | 30480 | 54346 | 46032 | 2325 | 26601 | 16685 | ] |
| T [ | 3613 | 3 | 9539 | 1872 | 20927 | 3864 | 228 | 729 | 19506 | 691 | 4880 | 5242 | 3520 | 6591 | ] |
