Detailed information of deep learning profile BP000659.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP000659.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR424JOE
Model: BPNet

Contribution weight matrix (CWM)

A [ 7.24e-03 -1.90e-05 5.44e-03 4.98e-02 1.11e-05 2.46e-02 -6.98e-04 1.92e-03 1.29e-03 -1.90e-03 -9.04e-06 -5.92e-04 1.49e-03 -3.42e-04 -1.48e-03 ]
C [ -6.13e-05 -1.54e-05 -9.17e-04 3.25e-06 6.86e-02 -9.19e-05 8.96e-04 -1.29e-03 1.99e-03 2.37e-03 -2.36e-04 -4.74e-04 -8.26e-04 3.23e-02 3.53e-03 ]
G [ 5.17e-03 4.90e-02 -5.64e-04 -9.36e-06 8.83e-07 1.00e-03 1.71e-04 -1.08e-03 9.14e-04 -1.30e-03 5.86e-02 -3.63e-04 -1.09e-03 -2.56e-04 -9.84e-05 ]
T [ -7.36e-04 8.85e-06 1.67e-03 -3.04e-05 5.01e-05 -4.43e-04 4.53e-03 3.29e-03 -7.33e-04 1.37e-02 -4.08e-05 3.67e-02 2.19e-03 -8.76e-04 4.99e-03 ]

Frequency matrix

A [ 6594 465 6085 13228 4 11060 2451 4364 3671 3020 762 1857 3182 2178 2590 ]
C [ 212 28 1611 34 13668 268 3227 2663 4143 1416 698 990 3021 8600 4571 ]
G [ 4634 12769 2817 81 5 676 3552 2505 3337 1072 11901 991 2503 599 942 ]
T [ 2255 433 3183 352 18 1692 4465 4163 2544 8187 334 9857 4989 2317 5591 ]

18 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000789.1 NR3C1 ENCSR000BHE A549 Homo sapiens
BP000837.1 NR3C1 ENCSR287FWE A549 Homo sapiens
BP000919.1 NR3C1 ENCSR908AOO A549 Homo sapiens
BP000983.1 NR3C1 ENCSR000BJC Ishikawa Homo sapiens
BP001035.1 NR3C1 ENCSR773NQB A549 Homo sapiens
BP001127.1 NR3C1 ENCSR660RYY A549 Homo sapiens
BP001151.1 NR3C1 ENCSR919OXR A549 Homo sapiens
BP001200.1 NR3C1 ENCSR458VTP A549 Homo sapiens
Showing 8 profiles of page 2 from 2 pages