This page shows detailed deep learning-derived predictions and motifs for CTCF in lung using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000663.1 |
| Cell line/tissue: | lung |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DMH |
| Model: | BPNet |
| A [ | -2.00e-03 | -4.01e-03 | -4.71e-03 | -9.41e-04 | -5.55e-04 | 1.18e-02 | -5.33e-04 | -3.33e-04 | -2.72e-03 | 2.73e-02 | -2.22e-03 | -6.81e-03 | -7.39e-04 | -4.02e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.88e-02 | 9.01e-02 | -1.24e-03 | 1.71e-01 | 2.49e-01 | 7.25e-02 | 1.00e-01 | 2.58e-01 | 2.31e-04 | -2.94e-03 | 1.30e-02 | 9.66e-03 | -3.55e-04 | -2.49e-03 | ] |
| G [ | 4.70e-02 | -1.32e-03 | 1.46e-01 | -4.55e-04 | -2.55e-05 | 5.68e-05 | -7.52e-05 | -8.56e-05 | -2.83e-04 | 2.13e-02 | 9.06e-02 | -1.15e-03 | 2.54e-01 | 1.30e-01 | ] |
| T [ | -4.62e-03 | 1.52e-02 | -4.22e-03 | -1.72e-03 | -8.12e-04 | -4.06e-03 | 3.18e-02 | -5.18e-04 | 1.12e-01 | -7.95e-03 | -2.11e-03 | 4.39e-02 | -8.85e-04 | -2.52e-03 | ] |
| A [ | 1988 | 924 | 1892 | 1887 | 157 | 8851 | 157 | 39 | 1120 | 8577 | 621 | 2707 | 0 | 1422 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 7660 | 11876 | 651 | 20666 | 23370 | 13166 | 13728 | 23676 | 1505 | 1766 | 7918 | 3201 | 2 | 1249 | ] |
| G [ | 11970 | 927 | 18231 | 706 | 46 | 781 | 142 | 18 | 713 | 9868 | 14195 | 725 | 23817 | 19063 | ] |
| T [ | 2204 | 10096 | 3048 | 565 | 250 | 1025 | 9796 | 90 | 20485 | 3611 | 1089 | 17190 | 4 | 2089 | ] |
