Detailed information of deep learning profile BP000665.1

This page shows detailed deep learning-derived predictions and motifs for PBX2 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: PBX2
Model ID: BP000665.1
Cell line/tissue: K562
Class: Homeo domain factors
Family: TALE-type homeo domain factors
Best Match(es): MA1113.1 MA1113.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P40425  
Source: ENCSR263DFP
Model: BPNet

Contribution weight matrix (CWM)

A [ -7.69e-04 1.89e-05 8.11e-04 8.70e-04 1.64e-04 7.91e-06 2.18e-02 6.15e-05 -5.40e-04 ]
C [ 2.19e-03 1.13e-02 2.48e-04 -5.51e-07 2.37e-04 4.34e-02 7.83e-05 6.51e-04 8.40e-03 ]
G [ 2.42e-03 3.51e-04 2.93e-05 3.77e-02 2.14e-05 4.76e-05 1.90e-04 2.08e-03 7.94e-04 ]
T [ 2.78e-03 -2.40e-04 1.76e-02 6.26e-06 2.30e-02 3.44e-05 -1.31e-04 9.01e-04 4.68e-04 ]

Frequency matrix

A [ 19986 20195 15851 363 12667 1 74491 17198 20710 ]
C [ 23636 38478 4023 52 2118 90048 2318 19398 25172 ]
G [ 19986 12819 3702 89420 4594 0 2527 27667 16214 ]
T [ 26451 18568 66484 225 70681 11 10724 25797 27964 ]

2 profiles found for the same TF (PBX2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000270.1 PBX2 ENCSR849DFF HepG2 Homo sapiens
BP001057.1 PBX2 ENCSR633EIC K562 Homo sapiens
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