This page shows detailed deep learning-derived predictions and motifs for CTCF in lower lobe of left lung using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000666.1 |
| Cell line/tissue: | lower lobe of left lung |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR133AFF |
| Model: | BPNet |
| A [ | -8.62e-04 | -2.56e-03 | -2.56e-03 | 1.44e-04 | -3.97e-04 | 6.30e-03 | -4.71e-04 | -2.29e-04 | -2.15e-03 | 1.94e-02 | -1.56e-03 | -5.06e-03 | -5.29e-04 | -2.30e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.08e-02 | 4.73e-02 | -8.44e-05 | 9.59e-02 | 1.50e-01 | 5.00e-02 | 6.41e-02 | 1.61e-01 | 4.90e-04 | -2.14e-03 | 9.04e-03 | 5.97e-03 | -2.34e-04 | -1.73e-03 | ] |
| G [ | 2.56e-02 | -1.17e-04 | 7.63e-02 | 5.90e-04 | -3.83e-05 | -1.97e-04 | -6.71e-05 | -4.80e-05 | -1.71e-04 | 1.44e-02 | 5.93e-02 | -4.88e-04 | 1.63e-01 | 8.57e-02 | ] |
| T [ | -2.79e-03 | 7.96e-03 | -2.49e-03 | -1.35e-03 | -5.99e-04 | -3.34e-03 | 1.71e-02 | -3.93e-04 | 7.56e-02 | -4.22e-03 | -1.60e-03 | 3.03e-02 | -6.70e-04 | -1.65e-03 | ] |
| A [ | 3073 | 1643 | 2719 | 2498 | 188 | 11682 | 249 | 59 | 1637 | 11788 | 927 | 4217 | 26 | 2015 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 10433 | 16596 | 985 | 28987 | 32700 | 18425 | 19660 | 33077 | 2338 | 2604 | 11540 | 4595 | 30 | 2009 | ] |
| G [ | 16445 | 1609 | 24889 | 1050 | 79 | 1329 | 246 | 28 | 974 | 13851 | 18988 | 1372 | 33021 | 26291 | ] |
| T [ | 3325 | 13428 | 4683 | 741 | 309 | 1839 | 13120 | 112 | 28326 | 5033 | 1821 | 23092 | 199 | 2961 | ] |
