This page shows detailed deep learning-derived predictions and motifs for CTCF in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000675.1 |
| Cell line/tissue: | K562 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DMA |
| Model: | BPNet |
| A [ | -1.61e-03 | -1.78e-03 | 2.17e-02 | -1.44e-03 | -4.57e-03 | 7.05e-02 | -5.50e-04 | 1.33e-02 | -6.74e-03 | -1.24e-03 | -2.48e-03 | -5.08e-03 | 6.48e-03 | -3.06e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.51e-02 | 1.73e-01 | 8.03e-04 | 4.97e-02 | 1.29e-02 | -5.87e-04 | -1.67e-04 | -3.37e-04 | -6.39e-04 | -1.09e-04 | 1.48e-03 | 9.42e-02 | 2.05e-04 | 3.82e-02 | ] |
| G [ | -2.90e-03 | -1.04e-03 | 7.92e-03 | 1.22e-02 | -2.60e-03 | 1.65e-03 | 1.87e-01 | 9.14e-02 | 5.83e-02 | 1.80e-01 | 1.15e-01 | -2.75e-04 | 6.63e-02 | 8.27e-03 | ] |
| T [ | -3.23e-03 | -1.40e-03 | -6.63e-03 | -2.62e-03 | 2.01e-02 | -2.57e-03 | -6.34e-04 | -9.78e-04 | 4.41e-03 | -9.48e-04 | -4.03e-04 | -3.49e-03 | -4.37e-03 | -6.12e-04 | ] |
| A [ | 8635 | 3328 | 45407 | 6661 | 13059 | 59671 | 1017 | 25623 | 7227 | 1252 | 2866 | 12895 | 27195 | 7929 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 56394 | 71467 | 5690 | 39211 | 29326 | 2463 | 245 | 588 | 3076 | 397 | 4274 | 53127 | 5931 | 38679 | ] |
| G [ | 6422 | 1389 | 12569 | 28002 | 8242 | 8374 | 75377 | 50000 | 43288 | 74557 | 63447 | 3964 | 39557 | 21453 | ] |
| T [ | 5841 | 1108 | 13626 | 3418 | 26665 | 6784 | 653 | 1081 | 23701 | 1086 | 6704 | 7306 | 4610 | 9231 | ] |