Detailed information of deep learning profile BP000676.1

This page shows detailed deep learning-derived predictions and motifs for TCF3 in GM12878 using a single trained BPNet model.

Model details

Name: TCF3
Model ID: BP000676.1
Cell line/tissue: GM12878
Class: Basic helix-loop-helix factors (bHLH)
Family: E2A
Best Match(es): MA0522.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P15923  
Source: ENCSR000BQT
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.83e-03 5.90e-03 5.91e-06 4.39e-02 1.75e-05 2.45e-06 4.24e-07 0.00e+00 -9.84e-05 ]
C [ 3.66e-03 3.70e-03 6.89e-02 4.23e-06 7.20e-03 4.13e-02 1.48e-05 2.04e-05 7.29e-03 ]
G [ 4.20e-03 5.78e-03 0.00e+00 1.33e-05 1.55e-02 1.31e-05 5.54e-06 6.73e-02 3.23e-03 ]
T [ -1.63e-03 -6.11e-05 0.00e+00 -1.60e-07 -5.83e-04 1.68e-05 4.05e-02 1.18e-06 3.80e-03 ]

Frequency matrix

A [ 13153 16114 17 50505 1383 761 1859 1 3991 ]
C [ 17328 17170 54700 972 20159 53095 2730 2 19959 ]
G [ 14522 17036 6 2739 26491 617 332 54703 17207 ]
T [ 9719 4403 0 507 6690 250 49802 17 13566 ]