This page shows detailed deep learning-derived predictions and motifs for CTCF in middle frontal area 46 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000677.1 |
| Cell line/tissue: | middle frontal area 46 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR715FHW |
| Model: | BPNet |
| A [ | -1.33e-03 | -3.31e-03 | -2.64e-03 | -6.87e-04 | -3.62e-04 | 4.63e-03 | -4.50e-04 | -2.61e-04 | -2.35e-03 | 1.72e-02 | -1.99e-03 | -5.79e-03 | -5.47e-04 | -2.95e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.20e-02 | 4.90e-02 | -7.98e-04 | 1.01e-01 | 1.55e-01 | 4.72e-02 | 6.09e-02 | 1.59e-01 | 8.89e-04 | -1.91e-03 | 1.20e-02 | 6.88e-03 | -2.89e-04 | -1.31e-03 | ] |
| G [ | 2.72e-02 | -8.28e-04 | 8.42e-02 | -5.43e-05 | 4.01e-06 | 3.15e-04 | -1.40e-05 | -2.96e-05 | -2.85e-06 | 1.59e-02 | 5.90e-02 | -4.18e-04 | 1.55e-01 | 8.41e-02 | ] |
| T [ | -2.81e-03 | 7.98e-03 | -3.18e-03 | -1.35e-03 | -4.76e-04 | -3.70e-03 | 1.55e-02 | -3.45e-04 | 6.21e-02 | -5.22e-03 | -2.09e-03 | 2.12e-02 | -7.95e-04 | -1.54e-03 | ] |
| A [ | 4562 | 2399 | 3647 | 3575 | 228 | 15954 | 586 | 204 | 3187 | 16063 | 1569 | 6389 | 166 | 3095 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 14829 | 21558 | 1461 | 38373 | 44200 | 23997 | 26259 | 44237 | 3883 | 4150 | 15865 | 6948 | 160 | 3312 | ] |
| G [ | 20989 | 2322 | 33411 | 1824 | 94 | 2271 | 782 | 82 | 1820 | 17608 | 24630 | 2422 | 43920 | 34054 | ] |
| T [ | 4507 | 18609 | 6369 | 1116 | 366 | 2665 | 17261 | 365 | 35998 | 7067 | 2824 | 29129 | 642 | 4427 | ] |
