This page shows detailed deep learning-derived predictions and motifs for CTCF in HCT116 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000683.1 |
| Cell line/tissue: | HCT116 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000BSE |
| Model: | BPNet |
| A [ | -1.71e-03 | -3.19e-03 | -2.63e-03 | -6.34e-04 | -4.35e-04 | 7.77e-03 | -4.05e-04 | -2.66e-04 | -1.88e-03 | 1.51e-02 | -1.78e-03 | -4.53e-03 | -5.45e-04 | -2.55e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.28e-02 | 5.21e-02 | -7.42e-04 | 1.12e-01 | 1.69e-01 | 4.63e-02 | 6.93e-02 | 1.74e-01 | 8.16e-04 | -1.21e-03 | 1.27e-02 | 4.01e-03 | -2.55e-04 | -1.50e-03 | ] |
| G [ | 3.51e-02 | -3.39e-04 | 9.55e-02 | -3.95e-05 | -5.11e-05 | -1.80e-04 | -1.01e-04 | -3.75e-05 | -2.15e-04 | 1.52e-02 | 5.58e-02 | -2.25e-04 | 1.55e-01 | 7.73e-02 | ] |
| T [ | -3.03e-03 | 9.34e-03 | -4.30e-03 | -1.28e-03 | -6.29e-04 | -3.09e-03 | 1.70e-02 | -3.08e-04 | 6.47e-02 | -5.04e-03 | -1.97e-03 | 2.62e-02 | -7.72e-04 | -1.55e-03 | ] |
| A [ | 4343 | 2281 | 3614 | 3523 | 406 | 15507 | 334 | 260 | 2918 | 15073 | 1479 | 6352 | 171 | 2859 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 12113 | 19008 | 1423 | 34869 | 40007 | 21840 | 24853 | 40296 | 3586 | 3231 | 14273 | 3926 | 175 | 2545 | ] |
| G [ | 20593 | 2320 | 30216 | 1571 | 98 | 1109 | 204 | 67 | 984 | 15886 | 22845 | 1870 | 40264 | 31503 | ] |
| T [ | 4062 | 17502 | 5857 | 1147 | 599 | 2655 | 15719 | 487 | 33622 | 6919 | 2512 | 28961 | 500 | 4204 | ] |
