This page shows detailed deep learning-derived predictions and motifs for CTCF in upper lobe of left lung using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000685.1 |
| Cell line/tissue: | upper lobe of left lung |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR799TJD |
| Model: | BPNet |
| A [ | -1.72e-03 | -4.86e-04 | 3.04e-02 | -1.68e-03 | -5.38e-03 | 8.09e-02 | -4.02e-04 | 2.14e-02 | -2.91e-03 | -7.15e-04 | -1.27e-03 | -2.50e-03 | 8.65e-03 | -3.02e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.92e-02 | 1.73e-01 | -9.80e-04 | 5.92e-02 | 1.52e-02 | -2.60e-04 | -4.25e-05 | -4.50e-05 | -3.00e-04 | -3.36e-05 | 7.52e-05 | 9.01e-02 | -6.30e-04 | 2.95e-02 | ] |
| G [ | -2.15e-03 | -1.33e-04 | 6.14e-03 | 1.09e-02 | -2.19e-03 | 4.29e-04 | 1.71e-01 | 7.02e-02 | 5.41e-02 | 1.65e-01 | 1.11e-01 | -6.13e-04 | 5.36e-02 | 1.13e-02 | ] |
| T [ | -2.52e-03 | -3.82e-04 | -4.82e-03 | -1.56e-03 | 1.87e-02 | -2.17e-03 | -1.97e-04 | -4.41e-04 | 5.79e-03 | -4.82e-04 | -5.64e-04 | -3.45e-03 | -2.97e-03 | -1.49e-03 | ] |
| A [ | 2246 | 77 | 17872 | 1143 | 3620 | 22363 | 11 | 11143 | 868 | 141 | 514 | 2983 | 10837 | 2430 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 19861 | 24914 | 808 | 14990 | 10478 | 536 | 2 | 135 | 625 | 25 | 638 | 19944 | 1003 | 12171 | ] |
| G [ | 1412 | 14 | 3414 | 8338 | 1812 | 1208 | 25008 | 13562 | 15056 | 24805 | 21880 | 492 | 12077 | 8230 | ] |
| T [ | 1507 | 20 | 2930 | 555 | 9116 | 917 | 4 | 186 | 8475 | 54 | 1993 | 1605 | 1109 | 2193 | ] |
