This page shows detailed deep learning-derived predictions and motifs for CTCF in fibroblast of villous mesenchyme using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000687.1 |
| Cell line/tissue: | fibroblast of villous mesenchyme |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DVQ |
| Model: | BPNet |
| A [ | -5.37e-04 | -3.79e-03 | -3.23e-03 | -8.92e-04 | -1.01e-03 | 1.67e-03 | -7.33e-04 | -3.82e-04 | -2.45e-03 | 2.14e-02 | -2.22e-03 | -6.35e-03 | -8.26e-04 | -3.04e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.02e-02 | 5.38e-02 | 1.46e-04 | 1.07e-01 | 1.66e-01 | 6.07e-02 | 8.59e-02 | 1.85e-01 | 9.83e-04 | -2.57e-03 | 1.24e-02 | 8.02e-03 | -5.54e-04 | -2.15e-03 | ] |
| G [ | 2.98e-02 | 1.11e-04 | 7.63e-02 | 1.09e-03 | -1.37e-04 | -3.10e-04 | -2.87e-04 | -1.18e-04 | -5.32e-04 | 1.70e-02 | 5.95e-02 | 5.99e-04 | 1.82e-01 | 9.78e-02 | ] |
| T [ | -3.18e-03 | 6.77e-03 | -3.50e-03 | -2.33e-03 | -1.38e-03 | -5.43e-03 | 1.37e-02 | -4.27e-04 | 8.49e-02 | -5.08e-03 | -1.51e-03 | 2.47e-02 | -1.70e-03 | -1.92e-03 | ] |
| A [ | 7396 | 4298 | 6026 | 5169 | 1337 | 17264 | 913 | 273 | 3627 | 21038 | 1885 | 9275 | 332 | 3555 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 17578 | 27224 | 3768 | 46323 | 54950 | 33670 | 36873 | 57727 | 5175 | 4784 | 20196 | 8732 | 316 | 3577 | ] |
| G [ | 26453 | 5234 | 37948 | 4297 | 933 | 2608 | 556 | 78 | 1618 | 23682 | 32703 | 2999 | 56481 | 45991 | ] |
| T [ | 7110 | 21780 | 10794 | 2747 | 1316 | 4995 | 20194 | 458 | 48116 | 9032 | 3752 | 37529 | 1407 | 5413 | ] |
