This page shows detailed deep learning-derived predictions and motifs for CTCF in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000691.1 |
| Cell line/tissue: | MCF-7 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR560BUE |
| Model: | BPNet |
| A [ | -1.94e-03 | -1.59e-03 | 2.32e-02 | -1.59e-03 | -4.45e-03 | 6.87e-02 | -3.49e-04 | 1.38e-02 | -4.89e-03 | -7.47e-04 | -1.09e-03 | -3.78e-03 | 9.84e-03 | -2.95e-03 | -3.53e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 7.63e-02 | 1.53e-01 | -2.47e-04 | 4.57e-02 | 1.51e-02 | -2.72e-04 | -8.24e-05 | -2.22e-04 | -2.53e-04 | -1.23e-05 | -7.42e-04 | 9.05e-02 | -1.06e-03 | 3.46e-02 | 1.16e-02 | ] |
| G [ | -1.89e-03 | -5.47e-04 | 6.60e-03 | 1.29e-02 | -2.00e-03 | 9.48e-04 | 1.67e-01 | 7.50e-02 | 4.07e-02 | 1.60e-01 | 1.11e-01 | -1.53e-03 | 5.47e-02 | 1.02e-02 | -1.55e-03 | ] |
| T [ | -2.40e-03 | -1.01e-03 | -4.86e-03 | -2.19e-03 | 1.82e-02 | -1.94e-03 | -4.70e-04 | -6.89e-04 | 8.64e-03 | -5.51e-04 | -1.42e-04 | -2.25e-03 | -3.63e-03 | -1.30e-03 | 1.57e-02 | ] |
| A [ | 6642 | 2351 | 36522 | 4749 | 9430 | 46614 | 657 | 21585 | 4280 | 594 | 649 | 8630 | 24259 | 5999 | 8270 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 41399 | 53059 | 3329 | 28649 | 22519 | 1364 | 113 | 295 | 1646 | 78 | 799 | 42004 | 2812 | 27196 | 19433 | ] |
| G [ | 4389 | 776 | 7761 | 21375 | 5146 | 4937 | 55817 | 34604 | 28652 | 55892 | 52004 | 1511 | 26763 | 17639 | 5773 | ] |
| T [ | 4542 | 786 | 9360 | 2199 | 19876 | 4057 | 385 | 488 | 22393 | 408 | 3520 | 4826 | 3138 | 6138 | 23495 | ] |
