Detailed information of deep learning profile BP000696.1

This page shows detailed deep learning-derived predictions and motifs for REST in PFSK-1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000696.1
Cell line/tissue: PFSK-1
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BJP
Model: BPNet

Contribution weight matrix (CWM)

A [ -9.13e-04 -4.63e-04 -1.03e-03 4.29e-05 3.75e-05 1.08e-01 -2.98e-05 1.24e-01 2.18e-05 -1.02e-03 3.51e-04 2.25e-04 -7.14e-04 ]
C [ 2.66e-03 2.51e-02 3.76e-03 7.38e-05 1.85e-04 1.25e-04 1.08e-01 1.32e-04 1.85e-04 5.55e-02 -9.55e-05 4.48e-02 4.83e-02 ]
G [ 3.34e-02 2.87e-03 -3.15e-04 1.49e-01 1.29e-01 1.57e-04 9.99e-05 0.00e+00 1.46e-01 -7.84e-04 2.01e-02 1.60e-03 -1.33e-04 ]
T [ -1.67e-03 8.56e-06 4.50e-02 1.99e-04 1.40e-04 2.43e-04 -1.27e-04 2.65e-05 1.79e-06 2.02e-04 1.58e-02 -1.09e-03 4.83e-04 ]

Frequency matrix

A [ 634 1087 475 31 74 4250 58 4524 60 716 960 605 463 ]
C [ 1899 1769 591 15 14 208 4087 25 13 2994 150 2838 3271 ]
G [ 1465 745 374 4546 4458 24 344 23 4518 309 1735 894 178 ]
T [ 601 998 3159 7 53 117 110 27 8 580 1754 262 687 ]

Other motif patterns

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000383.1 REST ENCSR867WPH liver Homo sapiens
BP000442.1 REST ENCSR000BJJ SK-N-SH Homo sapiens
BP000459.1 REST ENCSR000BMN HeLa-S3 Homo sapiens
BP000564.1 REST ENCSR000BQP A549 Homo sapiens
BP000728.1 REST ENCSR663WAR H1 Homo sapiens
BP000790.1 REST ENCSR000BTF HL-60 Homo sapiens
BP000875.1 REST ENCSR000BOZ SK-N-SH Homo sapiens
BP001141.1 REST ENCSR871KYB GM23338 Homo sapiens
Showing 8 profiles of page 3 from 3 pages