Detailed information of deep learning profile BP000696.1

This page shows detailed deep learning-derived predictions and motifs for REST in PFSK-1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000696.1
Cell line/tissue: PFSK-1
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BJP
Model: BPNet

Contribution weight matrix (CWM)

A [ 4.83e-04 -1.09e-03 1.58e-02 2.02e-04 1.79e-06 2.65e-05 -1.27e-04 2.43e-04 1.40e-04 1.99e-04 4.50e-02 8.56e-06 -1.67e-03 ]
C [ -1.33e-04 1.60e-03 2.01e-02 -7.84e-04 1.46e-01 0.00e+00 9.99e-05 1.57e-04 1.29e-01 1.49e-01 -3.15e-04 2.87e-03 3.34e-02 ]
G [ 4.83e-02 4.48e-02 -9.55e-05 5.55e-02 1.85e-04 1.32e-04 1.08e-01 1.25e-04 1.85e-04 7.38e-05 3.76e-03 2.51e-02 2.66e-03 ]
T [ -7.14e-04 2.25e-04 3.51e-04 -1.02e-03 2.18e-05 1.24e-01 -2.98e-05 1.08e-01 3.75e-05 4.29e-05 -1.03e-03 -4.63e-04 -9.13e-04 ]

Frequency matrix

A [ 687 262 1754 580 8 27 110 117 53 7 3159 998 601 ]
C [ 178 894 1735 309 4518 23 344 24 4458 4546 374 745 1465 ]
G [ 3271 2838 150 2994 13 25 4087 208 14 15 591 1769 1899 ]
T [ 463 605 960 716 60 4524 58 4250 74 31 475 1087 634 ]

Other motif patterns

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000001.1 REST ENCSR000ATM K562 Homo sapiens
BP000002.1 REST ENCSR000BGF GM12878 Homo sapiens
BP000004.1 REST ENCSR000BHM H1 Homo sapiens
BP000006.1 REST ENCSR000BJL HepG2 Homo sapiens
BP000007.1 REST ENCSR000BJO Panc1 Homo sapiens
BP000017.1 REST ENCSR000BMW K562 Homo sapiens
BP000024.1 REST ENCSR000BOT HepG2 Homo sapiens
BP000025.1 REST ENCSR000BOX PFSK-1 Homo sapiens
BP000027.1 REST ENCSR000BPK Panc1 Homo sapiens
BP000030.1 REST ENCSR000BQS GM12878 Homo sapiens
Showing 10 profiles of page 1 from 3 pages