Detailed information of deep learning profile BP000699.1

This page shows detailed deep learning-derived predictions and motifs for GABPA in HL-60 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: GABPA
Model ID: BP000699.1
Cell line/tissue: HL-60
Class: Tryptophan cluster factors
Family: Ets-related
Best Match(es): MA0062.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q06546  
Source: ENCSR000BTK
Model: BPNet

Contribution weight matrix (CWM)

A [ 1.65e-02 -7.40e-05 6.07e-05 1.37e-06 1.14e-06 0.00e+00 -8.70e-06 -3.53e-04 ]
C [ -1.40e-04 2.33e-02 -1.35e-05 1.58e-05 7.57e-02 8.68e-02 -2.39e-05 1.17e-03 ]
G [ 2.52e-03 1.41e-03 4.73e-05 1.38e-05 3.60e-06 5.71e-07 4.08e-02 1.87e-02 ]
T [ -8.53e-04 1.09e-03 4.37e-02 6.50e-02 1.18e-05 3.75e-06 3.55e-03 4.22e-05 ]

Frequency matrix

A [ 18985 1845 3185 673 459 5 351 2982 ]
C [ 7570 25674 2089 1575 45640 47382 6081 14779 ]
G [ 14757 9442 2163 787 685 33 24231 22353 ]
T [ 6133 10485 40008 44411 662 26 16783 7331 ]

13 profiles found for the same TF (GABPA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000192.1 GABPA ENCSR000BIW H1 Homo sapiens
BP000204.1 GABPA ENCSR350ORK liver Homo sapiens
BP000323.1 GABPA ENCSR269TNX HepG2 Homo sapiens
BP000347.1 GABPA ENCSR331HPA GM12878 Homo sapiens
BP000391.1 GABPA ENCSR038RXU MCF-7 Homo sapiens
BP000406.1 GABPA ENCSR000BTG SK-N-SH Homo sapiens
BP000563.1 GABPA ENCSR000BLO K562 Homo sapiens
BP000582.1 GABPA ENCSR000BUK MCF-7 Homo sapiens
BP000823.1 GABPA ENCSR000BJK HepG2 Homo sapiens
BP000840.1 GABPA ENCSR038GMB liver Homo sapiens
Showing 10 profiles of page 1 from 2 pages