Detailed information of deep learning profile BP000699.1

This page shows detailed deep learning-derived predictions and motifs for GABPA in HL-60 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: GABPA
Model ID: BP000699.1
Cell line/tissue: HL-60
Class: Tryptophan cluster factors
Family: Ets-related
Best Match(es): MA0062.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q06546  
Source: ENCSR000BTK
Model: BPNet

Contribution weight matrix (CWM)

A [ 1.65e-02 -7.40e-05 6.07e-05 1.37e-06 1.14e-06 0.00e+00 -8.70e-06 -3.53e-04 ]
C [ -1.40e-04 2.33e-02 -1.35e-05 1.58e-05 7.57e-02 8.68e-02 -2.39e-05 1.17e-03 ]
G [ 2.52e-03 1.41e-03 4.73e-05 1.38e-05 3.60e-06 5.71e-07 4.08e-02 1.87e-02 ]
T [ -8.53e-04 1.09e-03 4.37e-02 6.50e-02 1.18e-05 3.75e-06 3.55e-03 4.22e-05 ]

Frequency matrix

A [ 18985 1845 3185 673 459 5 351 2982 ]
C [ 7570 25674 2089 1575 45640 47382 6081 14779 ]
G [ 14757 9442 2163 787 685 33 24231 22353 ]
T [ 6133 10485 40008 44411 662 26 16783 7331 ]

13 profiles found for the same TF (GABPA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000852.1 GABPA ENCSR290MUH K562 Homo sapiens
BP001058.1 GABPA ENCSR000BHS HeLa-S3 Homo sapiens
BP001108.1 GABPA ENCSR000BPY A549 Homo sapiens
Showing 3 profiles of page 2 from 2 pages