Detailed information of deep learning profile BP000701.1

This page shows detailed deep learning-derived predictions and motifs for TCF4 in SK-N-SH using a single trained BPNet model.

Model details

Name: TCF4
Model ID: BP000701.1
Cell line/tissue: SK-N-SH
Class: Basic helix-loop-helix factors (bHLH)
Family: E2A
Best Match(es): MA0830.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P15884  
Source: ENCSR922RFY
Model: BPNet

Contribution weight matrix (CWM)

A [ 5.79e-04 2.31e-03 -4.17e-05 3.82e-02 0.00e+00 5.71e-04 2.83e-06 0.00e+00 -2.88e-06 -4.84e-04 ]
C [ -6.49e-05 6.31e-03 3.70e-02 4.67e-06 -2.64e-05 2.97e-02 0.00e+00 0.00e+00 8.52e-04 3.89e-03 ]
G [ 9.48e-03 1.13e-03 2.64e-05 1.30e-04 1.37e-03 -1.23e-05 0.00e+00 5.76e-02 1.55e-02 -8.42e-04 ]
T [ -6.06e-04 -1.60e-04 2.73e-05 -1.78e-05 2.98e-02 -5.63e-06 4.33e-02 0.00e+00 1.53e-03 4.16e-03 ]

Frequency matrix

A [ 15594 17956 3760 49016 419 5889 835 0 2070 11738 ]
C [ 10204 16180 45352 1642 1873 43177 163 6 11907 14620 ]
G [ 18646 15352 3685 3282 9031 5740 10 55463 25415 7744 ]
T [ 11113 6069 2760 1617 44234 752 54549 88 16165 21455 ]